[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 4,307 items for (author: zheng & a)

EMDB-63785:
Cryo-EM structure of dopaminated Tau fibril
Method: helical / : Liu Z, Li X, Liu C

PDB-9mc2:
Cryo-EM structure of dopaminated Tau fibril
Method: helical / : Liu Z, Li X, Liu C

EMDB-74542:
Structure of SpyCas9 in complex with the anti-CRISPR protein AcrIIA26
Method: single particle / : Zheng I, Learn B, Bailey S

PDB-9zq6:
Structure of SpyCas9 in complex with the anti-CRISPR protein AcrIIA26
Method: single particle / : Zheng I, Learn B, Bailey S

EMDB-67108:
Cryo-EM structure of Receptor of GPR75
Method: single particle / : Wu C, Yuan Q

EMDB-67109:
The cryo_EM structure of GPR75 complex
Method: single particle / : Wu C, Yuan Q

EMDB-67110:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

EMDB-67119:
Cryo-EM structure of apo form of GPR75-bRIL-Fab complex
Method: single particle / : Wu C, Yuan Q

PDB-9xqc:
A composite Cryo-EM structure of GPR75
Method: single particle / : Yuan Q, Wu C

PDB-9xqn:
Cryo-EM structure of apo form of GPR75-bRIL-Fab complex
Method: single particle / : Wu C, Yuan Q

EMDB-72405:
Cryo-EM structure of the human TRPM4 channel in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-72406:
Cryo-EM structure of the human TRPM4 channel in complex with EGTA and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-72407:
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9y2a:
Cryo-EM structure of the human TRPM4 channel in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9y2b:
Cryo-EM structure of the human TRPM4 channel in complex with EGTA and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

PDB-9y2c:
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium and DAB at 37 degrees Celsius
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-49942:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

PDB-9nyr:
Cryo-EM structure of CDK2/CyclinE1 in complex with CRBN/DDB1 and Cpd 24
Method: single particle / : Collier P, Zheng X, Ford M, Weiss M, Aversa R, Chen D, Li K, Growney JD, Yang A, Sathappa M, Breitkopf SB, Enerson B, Sawant R, Su L, Howarth L, Liang T, Paul A, Sharma K, Williams J, Kwiatkowski NP

EMDB-65825:
Structure of type II Abeta fibrils from 5xFAD mice
Method: helical / : Cao Q, Song M

EMDB-65826:
Structure of Type II Abeta fibrils from AppNL-FPsen1P117L mice
Method: helical / : Cao Q, Song M

EMDB-67622:
Structure of minor species of Abeta fibrils from AppNL-FPsen1P117L mice
Method: helical / : Cao Q, Song M

EMDB-64273:
Cryo-EM structure of VTC complex(Vtc5/Vtc4/Vtc3/Vtc1)
Method: single particle / : Zhang J, Du Z, Liu Z

PDB-9umg:
Cryo-EM structure of VTC complex(Vtc5/Vtc4/Vtc3/Vtc1)
Method: single particle / : Zhang J, Du Z, Liu Z

EMDB-61131:
Cryo-EM structure of aPlexinA1-19-43 Fab in complex with PlexinA1 dimer
Method: single particle / : Tian H, Fung CP

PDB-9j4c:
Cryo-EM structure of aPlexinA1-19-43 Fab in complex with PlexinA1 dimer
Method: single particle / : Tian H, Fung CP

EMDB-65163:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66328:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-66330:
focused map for HSV-1 helicase-primase in complex with ssDNA, ADP and magnesium
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

PDB-9vlq:
herpes simplex virus type 1 helicase-primase structure in complex with ssDNA, ADP and magnesium ion
Method: single particle / : Wu YQ, Jiang ZY, Chen XL, Zheng ZY, Dong CJ

EMDB-63208:
Cryo-EM structure of RSV pre-F (sc9-10 DS-Cav1, strain A2) in complex with Fabs 1A2 and 1B6
Method: single particle / : Liu L, Zheng Q, Li S, Zheng Z, Xia N

EMDB-65208:
Structure of the Bacteroides fragilis NCTC9343 T6SS Hcp2-Hcp3 Heterohexamer in Complex with the Effector Bte1
Method: single particle / : Zheng SN, Chen Z, Li WX, Gao X

EMDB-65209:
Bacteroides fragilis NCTC9343 T6SS Hcp2-Hcp3 heterohexamer complex
Method: single particle / : Zheng SN, Chen Z, Li WX, Gao X

PDB-9vnd:
Structure of the Bacteroides fragilis NCTC9343 T6SS Hcp2-Hcp3 Heterohexamer in Complex with the Effector Bte1
Method: single particle / : Zheng SN, Chen Z, Li WX, Gao X

PDB-9vne:
Bacteroides fragilis NCTC9343 T6SS Hcp2-Hcp3 heterohexamer complex
Method: single particle / : Zheng SN, Chen Z, Li WX, Gao X

EMDB-72372:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-trimer map 4)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72373:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 1)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72374:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 2)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-72375:
Polyclonal immune complex of guinea pig Fab from sera binding Ebola glycoprotein (nsEM, GP-Ferritin map 3)
Method: single particle / : Rubio AA, Vasquez S, Barnes CO

EMDB-65405:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

EMDB-65406:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

PDB-9vx1:
The cryo-EM structure of gRNA-bound SPARDA complex
Method: single particle / : Li Y, Jiang Y, Zheng Q, Li S

PDB-9vx6:
Helical structure of gRNA-tDNA SPARDA complex
Method: helical / : Li Y, Zheng Q, Li S, Jiang Y

EMDB-72178:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER, Lander GC

PDB-9q33:
Cereblon Ternary Complex with Blimp1 and compound 5
Method: single particle / : Watson ER

EMDB-63884:
The 1:1 cryo-EM structure of BAP1/ASXL1-K351Ub in complex with H2AK119Ub nucleosome
Method: single particle / : Ai HS, Liu L

EMDB-71244:
The consensus map of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71245:
The open state of zebrafish TRPM5 with 1mM EDTA and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71246:
Zebrafish TRPM5 with 5mM calcium and 0.5mM CBTA
Method: single particle / : Ruan Z, Du J, Lu W

EMDB-71247:
Zebrafish TRPM5 with 0.2mM calcium
Method: single particle / : Ruan Z, Du J, Lu W, Li Y

EMDB-71248:
Zebrafish TRPM5 with 1uM calcium
Method: single particle / : Ruan Z, Du J, Lu W

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more