[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 17,156 items for (author: zhang & n)

PDB-9ux7:
CryoEM Structure of LmuAB-DNA complex
Method: single particle / : Li M, Zhao X, An L, Li S, Zhang K, Feng Y

PDB-9ux8:
CryoEM Structure of LmuAB Apo State
Method: single particle / : Li M, Zhao X, An L, Li S, Zhang K, Feng Y

PDB-9uxh:
type II Lamassu, LmuACB with DNA
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

PDB-9uxi:
type II Lamassu, LmuA tetramer
Method: single particle / : Zhao X, Li S, Feng Y, Zhang K

PDB-9uxk:
type II Lamassu, LmuACB from Vibrio cholerae O1 El
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

PDB-9uxl:
type II Lamassu, LmuACB from Vibrio cholerae O1 El
Method: single particle / : Zhao X, Li M, Li S, Feng Y, Zhang K

PDB-9uje:
Cryo-EM structure of SARS-CoV2 KP.3.1.1 spike protein
Method: single particle / : He MZ

PDB-9u5p:
HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-dimer conformation
Method: single particle / : Yang B, Wang Q, Sun SW, Zhang X

PDB-9v7n:
Cryo-EM structures of the Azoarcus pre-tRNA(ILE) conformation a undergoing the first-step self-splicing
Method: single particle / : Hong Y, Liu J, Zhang X, Liu J, Li S, Zhang K

PDB-9v7o:
Cryo-EM structures of the Azoarcus pre-tRNA(ILE) conformation b undergoing the first-step self-splicing
Method: single particle / : Hong Y, Liu J, Zhang X, Liu J, Li S, Zhang K

PDB-9v7p:
Cryo-EM structures of the Azoarcus pre-tRNA(ILE) intron conformation after the self-splicing
Method: single particle / : Hong Y, Liu J, Zhang X, Liu J, Li S, Zhang K

PDB-9v7q:
Cryo-EM structures of the Azoarcus pre-tRNA(ILE) intron conformation after the cyclization
Method: single particle / : Hong Y, Liu J, Zhang X, Liu J, Li S, Zhang K

PDB-9x6b:
Cryo-EM structure of the Azoarcus sp. BH72 pre-tRNA(ILE) intron after second-step cyclization (circular form)
Method: single particle / : Hong Y, Liu JS, Zhang K, Li S

PDB-9u5r:
HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation 2
Method: single particle / : Yang B, Wang Q, Sun SW, Zhang X

PDB-9u5q:
HRV14 3C in complex with single chain antibody YDF and cloverleafRNA-conformation1
Method: single particle / : Yang B, Wang Q, Sun SW, Zhang X

EMDB-65192:
Cryo-EM structure of the a-KG-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65193:
Cryo-EM structure of the ITA-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65194:
Cryo-EM structure of the A-1-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-65222:
Cryo-EM structure of the OXGR1(CA)-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vmn:
Cryo-EM structure of the a-KG-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vmo:
Cryo-EM structure of the ITA-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vmp:
Cryo-EM structure of the A-1-OXGR1-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

PDB-9vo2:
Cryo-EM structure of the OXGR1(CA)-Gq complex
Method: single particle / : Tang XJ, Sun JP, Guo LL, Li J, Deng ZL, Xiao WQ, Zhu Y, Zhu KK

EMDB-64748:
Calypso/Asx/NCP-ub complex
Method: single particle / : Wang C, He J

PDB-9v33:
Calypso/Asx/NCP-ub complex
Method: single particle / : Wang C, He J

EMDB-73040:
cryoEM map of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

EMDB-73041:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

PDB-9yjz:
cryoEM structure of Apo Aspergillus fumigatus acetolactate synthase (ALS)
Method: single particle / : Hu Y

PDB-9yk0:
cryoEM structure of Aspergillus fumigatus acetolactate synthase (ALS) in complex with a novel inhibitor
Method: single particle / : Hu Y

EMDB-64601:
The Structural Basis of ClpP1 in Pseudomonas plecoglossicida
Method: single particle / : Jingjie C

PDB-9uxt:
The Structural Basis of ClpP1 in Pseudomonas plecoglossicida
Method: single particle / : Jingjie C

EMDB-67153:
LolCDE in complex with SMT-738_3
Method: single particle / : Dong CJ, Li HT

PDB-9xro:
LolCDE in complex with SMT-738_3
Method: single particle / : Dong CJ, Li HT

EMDB-70619:
In situ mitoribosome focused on the mtLSU
Method: single particle / : Wang S, Xiong Y, Zhang Y

EMDB-64577:
local ATPase-NCP density map of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

PDB-9ux9:
local ATPase-NCP structure of the ncBAF-nucleosome complex in the ADP-BeFx-bound state
Method: single particle / : Sun F, Zou B, Li H, Xu C, Luo Q, Wang C, Xu P, Pei D, Chen J, Qin D, Zhang Y, He J

EMDB-63693:
At S1+tRNA trimer
Method: single particle / : Zhang SS

PDB-9m7u:
At S1+tRNA trimer
Method: single particle / : Zhang SS

EMDB-62620:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q, Xia N

EMDB-65522:
Cryo-EM structure of a 1C4 SpyTag-SpyCatcher mi3 nanoparticle
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-65523:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9kwy:
Cryo-EM structure of SARS-CoV-2 RBD in complex with ACE2 and mAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

PDB-9w14:
Cryo-EM structure of SARS-CoV-2 WT spike protein in complex with nAb 1C4
Method: single particle / : Sun H, Jiang Y, Li S, Zheng Q

EMDB-61477:
Cryo-EM structure of RacrIC1-Cascade IC1-complex II
Method: single particle / : Wang H, Zhang S, Li S, Zhang K, Feng Y

EMDB-61478:
Cryo-EM structure of RacrIC1-Cascade IC1-complex I
Method: single particle / : Wang H, Zhang S, Li S, Zhang K, Feng Y

EMDB-61479:
Cryo-EM structure of RacrIC1-Cascade IC1-complex III
Method: single particle / : Wang H, Zhang S, Li S, Zhang K, Feng Y

PDB-9jhb:
Cryo-EM structure of RacrIC1-Cascade IC1-complex II
Method: single particle / : Wang H, Zhang S, Li S, Zhang K, Feng Y

PDB-9jhc:
Cryo-EM structure of RacrIC1-Cascade IC1-complex I
Method: single particle / : Wang H, Zhang S, Li S, Zhang K, Feng Y

PDB-9jhd:
Cryo-EM structure of RacrIC1-Cascade IC1-complex III
Method: single particle / : Wang H, Zhang S, Li S, Zhang K, Feng Y

EMDB-63517:
Cryo-EM structure of PTH1R-beta-arrestin1 complex in state 1
Method: single particle / : Zhai X, Guo J, Shen Q, Chen L, Wang G, Shen D, Zhang C, Xu X, Mao C, Zhang Y, Liu Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more