[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 20,215 items for (author: yu & d)

EMDB-70900:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (D1 domain local refine)
Method: single particle / : Jin M, Rini JM

EMDB-70901:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan
Method: single particle / : Jin M, Rini JM

EMDB-70902:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein (local refined D1 domain)
Method: single particle / : Jin M, Rini JM

EMDB-70903:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein
Method: single particle / : Jin M, Rini JM

EMDB-70904:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (Local refined D1 domain)
Method: single particle / : Jin M, Rini JM

PDB-9ovk:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (D1 domain local refine)
Method: single particle / : Jin M, Rini JM

PDB-9ovl:
Cryo-EM structure of HCoV-OC43-Lab Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan
Method: single particle / : Jin M, Rini JM

PDB-9ovm:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein (local refined D1 domain)
Method: single particle / : Jin M, Rini JM

PDB-9ovn:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein
Method: single particle / : Jin M, Rini JM

PDB-9ovo:
Cryo-EM structure of HCoV-OC43-C2 Spike glycoprotein in complex with 9O-acetyl GD3 sialoglycan (Local refined D1 domain)
Method: single particle / : Jin M, Rini JM

EMDB-54381:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

EMDB-54382:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

EMDB-54383:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54385:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54386:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54387:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54388:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54389:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54392:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54393:
Aquifex aeolicus lumazine synthase L121A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54394:
Aquifex aeolicus lumazine synthase I125A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54395:
Aquifex aeolicus lumazine synthase I125A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryi:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

PDB-9ryj:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

PDB-9ryk:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

PDB-9rym:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

PDB-9ryn:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryo:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryp:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryq:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryu:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryv:
Aquifex aeolicus lumazine synthase L121A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryw:
Aquifex aeolicus lumazine synthase I125A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryx:
Aquifex aeolicus lumazine synthase I125A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-64861:
Cryo-EM structure of the ArlB filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

EMDB-64862:
Cryo-EM structure of the inner core of ArlA2 filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

EMDB-67194:
Cryo-EM structure of ArlA2 filament of Haloarcula marismortui
Method: helical / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

PDB-9v95:
Cryo-EM structure of the ArlB filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

PDB-9v96:
Cryo-EM structure of the inner core of ArlA2 filament of Haloarcula marismortui
Method: single particle / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

PDB-9xtb:
Cryo-EM structure of ArlA2 filament of Haloarcula marismortui
Method: helical / : Meshcheryakov VA, Hyun J, Syutkin AS, Pyatibratov MG, Wolf M

EMDB-54374:
CryoEM structure of transcribing RNA polymerase II elongation complex in post-catalysis state
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

PDB-9ryb:
CryoEM structure of transcribing RNA polymerase II elongation complex in post-catalysis state
Method: single particle / : Li Q, Yi G, Zhang P, Wang D

EMDB-75437:
Importin-9 bound to ETS homologous factor (EHF)
Method: single particle / : Bernardes NE, Lankford K, McConville M, Chook YM, Liszczak G

PDB-10sm:
Importin-9 bound to ETS homologous factor (EHF)
Method: single particle / : Bernardes NE, Lankford K, McConville M, Chook YM, Liszczak G

EMDB-65364:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65365:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65366:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65367:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

EMDB-65368:
Cryo-EM structure of the Nipah virus RNA-dependent RNA polymerase complex bound to allosteric inhibitor ERDRP-0519
Method: single particle / : Du T, Wang J, Wu S, Ru H

PDB-9vui:
Cryo-EM structure of the human measles virus RNA-dependent RNA polymerase complex bound to viral protein C
Method: single particle / : Du T, Wang J, Wu S, Ru H

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more