[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 10,437 items for (author: yi & t)

EMDB-73147:
Constituent EM map: Focused refinement on NTD+SPRY+Calstabin-1 of mouse RyR1 (including auxiliary transmembrane helix TMx; EGTA-only dataset)
Method: single particle / : Weninger G, Marks AR

EMDB-73148:
Constituent EM map: Focused refinement on JSol+CSol of mouse RyR1 (including auxiliary transmembrane helix TMx; EGTA-only dataset)
Method: single particle / : Weninger G, Marks AR

EMDB-73149:
Constituent EM map: Focused refinement on BSol of mouse RyR1 (including auxiliary transmembrane helix TMx; EGTA-only dataset)
Method: single particle / : Weninger G, Marks AR

EMDB-73151:
Constituent EM map: Focused refinement on Ry12 of mouse RyR1 (including auxiliary transmembrane helix TMx; EGTA-only dataset)
Method: single particle / : Weninger G, Marks AR

EMDB-73152:
Constituent EM map: Focused refinement on Ry34 of mouse RyR1 (including auxiliary transmembrane helix TMx; EGTA-only dataset)
Method: single particle / : Weninger G, Marks AR

EMDB-73154:
Constituent EM map: Focused refinement on NTD+SPRY+Calstabin-1 of mouse RyR1 (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73155:
Constituent EM map: Focused refinement on JSol+CSol of mouse RyR1 (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73156:
Constituent EM map: Focused refinement on BSol of mouse RyR1 (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73157:
Constituent EM map: Focused refinement on Ry12 of mouse RyR1 (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73158:
Constituent EM map: Focused refinement on Ry34 of mouse RyR1 (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73159:
Constituent EM map: Focused refinement on NTD+SPRY+Calstabin-1 of mouse RyR1 (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73160:
Constituent EM map: Focused refinement on JSol+CSol of mouse RyR1 (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73161:
Constituent EM map: Focused refinement on BSol of mouse RyR1 (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73162:
Constituent EM map: Focused refinement on Ry12 of mouse RyR1 (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73163:
Constituent EM map: Focused refinement on Ry34 of mouse RyR1 (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73164:
Constituent EM map: Focused refinement on NTD+SPRY+Calstabin-1 of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73165:
Constituent EM map: Focused refinement on JSol+CSol of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73166:
Constituent EM map: Focused refinement on BSol of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73167:
Constituent EM map: Focused refinement on Ry12 of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73169:
Constituent EM map: Focused refinement on Ry34 of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; open pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73170:
Constituent EM map: Focused refinement on NTD+SPRY+Calstabin-1 of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73171:
Constituent EM map: Focused refinement on JSol+CSol of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73172:
Constituent EM map: Focused refinement on BSol of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73177:
Constituent EM map: Focused refinement on Ry12 of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-73180:
Constituent EM map: Focused refinement on Ry34 of mouse RyR1 with simvastatin (Ca2+/CFF/ATP dataset; closed pore)
Method: single particle / : Weninger G, Marks AR

EMDB-63452:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

PDB-9lwo:
Cryo-EM structure of the cytosolic ARMH2-EFCAB9-CATSPERz subcomplex of the mouse CatSpermasome
Method: single particle / : Zhao Q, Lin S, Xu Q, Wu J

EMDB-64077:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-64078:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue6:
Cryo-EM structure of SARS-CoV-2 KP.2 spike RBD in complex with ACE2
Method: single particle / : Jin XH, Sun L

PDB-9ue7:
Cryo-EM structure of SARS-CoV-2 KP.2 spike in complex with ACE2
Method: single particle / : Jin XH, Sun L

EMDB-72631:
Cryo-EM Structure of Gp77 within the In Vitro Reconstituted RAZR:GP77 Complex
Method: single particle / : Yifei L, Zhang T, Laub M, Ghanbarpour A

PDB-9y6u:
Cryo-EM Structure of Gp77 within the In Vitro Reconstituted RAZR:GP77 Complex
Method: single particle / : Yifei L, Zhang T, Laub M, Ghanbarpour A

EMDB-72692:
Focused-Refinement Cryo-EM Map of the RAZR-ZFD Domain within the In Vitro Reconstituted RAZR.Gp77 Complex
Method: single particle / : Lyu Y, Zhang T, Laub M, Ghanbarpour A

EMDB-55351:
Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
Method: single particle / : Yudin D, Jaskolowski M, Scaiola A, Ban N

PDB-9syr:
Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD
Method: single particle / : Yudin D, Jaskolowski M, Scaiola A, Ban N

EMDB-63181:
Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

EMDB-63182:
Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

PDB-9lkl:
Cryo-EM map of C1ql1-gC1q hexamer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

PDB-9lkm:
Focused map of C1ql1-gC1q trimer and BAI3-eCUB complex
Method: single particle / : Liao L, Niu F, Wei Z

EMDB-70143:
Cryo-EM structure of human SWELL1-PSA heterocomplex
Method: single particle / : Hagino T, Twomey EC, Qiu Z

PDB-9o5k:
Cryo-EM structure of human SWELL1-PSA heterocomplex
Method: single particle / : Hagino T, Twomey EC, Qiu Z

EMDB-73821:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

PDB-9z5q:
HECT domain of NEDD4-2 complex with a targeted nanobody, nb.C11
Method: single particle / : Afriyie E, Clarke OB

EMDB-49911:
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49915:
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49922:
LmuABC_apo
Method: single particle / : Chakravarti A, Zhang Z

EMDB-49934:
LmuABC-DNA
Method: single particle / : Chakravarti A, Zhang Z

PDB-9nxx:
LmuA_conformation 1
Method: single particle / : Chakravarti A, Zhang Z

PDB-9ny1:
LmuA_conformation 2_assymetric
Method: single particle / : Chakravarti A, Zhang Z

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more