[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,556 items for (author: yang & ch)

EMDB-74939:
Cryo-EM structure of the monomeric HIV-2 Vif-human APOBEC3H-CBFbeta complex
Method: single particle / : Niu Y, Lilly M, Ronayne EK, Emerman M, Chesarino NM, Gross JD

EMDB-74940:
Cryo-EM structure of the dimeric HIV-2 Vif-human APOBEC3H-CBFbeta complex
Method: single particle / : Niu Y, Lilly M, Ronayne EK, Emerman M, Chesarino NM, Gross JD

PDB-9zy0:
Cryo-EM structure of the monomeric HIV-2 Vif-human APOBEC3H-CBFbeta complex
Method: single particle / : Niu Y, Lilly M, Ronayne EK, Emerman M, Chesarino NM, Gross JD

PDB-9zy1:
Cryo-EM structure of the dimeric HIV-2 Vif-human APOBEC3H-CBFbeta complex
Method: single particle / : Niu Y, Lilly M, Ronayne EK, Emerman M, Chesarino NM, Gross JD

EMDB-81807:
In situ structure of mouse urate oxidase assembly with helical symmetry applied
Method: single particle / : Yang JH, Chen Z, Guo Q

PDB-43dy:
In situ structure of mouse urate oxidase assembly with helical symmetry applied
Method: single particle / : Yang JH, Chen Z, Guo Q

EMDB-65291:
CryoEM map of PARP10 oligomer
Method: single particle / : Xu Q, Chen XX, Shi ZB

EMDB-65272:
The structure of DmOR67d-DmOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

EMDB-65274:
The structure of DmOR67d-DmOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqp:
The structure of DmOR67d-DmOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqr:
The structure of DmOR67d-DmOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

EMDB-69132:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

PDB-23or:
Cryo-EM structure of the Retron-Eco8-SSB complex
Method: single particle / : Zhang JT, Ji CG, Li ZL, Wei XY, Jia N

EMDB-68840:
Cryo-EM map of mouse urate oxidase in complex with uric acid
Method: single particle / : Yang JH, Chen Z, Guo Q

EMDB-68842:
Tomogram of mouse liver tissue containning urate oxidase assembly
Method: electron tomography / : Yang JH, Chen Z, Guo Q

EMDB-68843:
Subtomogram averaged mouse UOX assembly map
Method: subtomogram averaging / : Yang JH, Chen Z, Guo Q

EMDB-68844:
Subtomogram averaged mouse UOX assembly map with helical symmetry applied
Method: subtomogram averaging / : Yang JH, Chen Z, Guo Q

EMDB-68846:
Subtomogram averaged porcine UOX assembly map with helical symmetry applied
Method: subtomogram averaging / : Yang JH, Chen Z, Guo Q

EMDB-68847:
Subtomogram averaged rat UOX assembly map
Method: subtomogram averaging / : Yang JH, Chen Z, Guo Q

EMDB-81572:
Cryo-EM map of mouse urate oxidase in the apo state
Method: single particle / : Yang JH, Chen Z, Guo Q

EMDB-81573:
Subtomogram averaged porcine UOX assembly map
Method: subtomogram averaging / : Yang JH, Chen Z, Guo Q

EMDB-81808:
Subtomogram averaged rat UOX assembly map with helical symmetry applied
Method: subtomogram averaging / : Yang JH, Chen Z, Guo Q

PDB-23bt:
Structure of mouse urate oxidase in complex with uric acid
Method: single particle / : Yang JH, Chen Z, Guo Q

PDB-27zv:
Structure of mouse urate oxidase in the apo state
Method: single particle / : Yang JH, Chen Z, Guo Q

EMDB-65271:
The structure of DmOR67d-DmOrco in the apo state
Method: single particle / : Wang J, Guo J

EMDB-65275:
The structure of DbOR67d-DbOrco in the apo-like state
Method: single particle / : Wang J, Guo J

EMDB-65276:
The structure of DbOR67d-DbOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

EMDB-65277:
The structure of DbOR67d-DbOrco in the Z11-bound state
Method: single particle / : Wang J, Guo J

EMDB-65278:
The structure of DbOR67d-DbOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqo:
The structure of DmOR67d-DmOrco in the apo state
Method: single particle / : Wang J, Guo J

PDB-9vqs:
The structure of DbOR67d-DbOrco in the apo-like state
Method: single particle / : Wang J, Guo J

PDB-9vqt:
The structure of DbOR67d-DbOrco in the cVA-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqu:
The structure of DbOR67d-DbOrco in the Z11-bound state
Method: single particle / : Wang J, Guo J

PDB-9vqv:
The structure of DbOR67d-DbOrco in the VUAA1-bound state
Method: single particle / : Wang J, Guo J

EMDB-62954:
Cryo-EM structure of the Retron-Eco8 complex
Method: single particle / : Zhang JT, Ji CG, Jia N

EMDB-66110:
Cryo-EM structure of the Retron-Eco8 complex in the presence of ATP
Method: single particle / : Zhang JT, Ji CG, Jia N

PDB-9lbq:
Cryo-EM structure of the Retron-Eco8 complex
Method: single particle / : Zhang JT, Ji CG, Jia N

PDB-9wn8:
Cryo-EM structure of the Retron-Eco8 complex in the presence of ATP
Method: single particle / : Zhang JT, Ji CG, Jia N

EMDB-75432:
The CryoEM structure of T8 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-75433:
The CryoEM structure of T10 type1 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10se:
The CryoEM structure of T8 nanofiber
Method: helical / : Zhang H, Yang Y

PDB-10sf:
The CryoEM structure of T10 type1 nanofiber
Method: helical / : Zhang H, Yang Y

EMDB-64397:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64398:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-64399:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upm:
Cryo-EM structure of macaque red cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upn:
Cryo-EM structure of macaque green cone pigment with Q114N mutation
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

PDB-9upo:
Cryo-EM structure of macaque green cone pigment wild type
Method: single particle / : Ohashi S, Kojima A, Fukuda M, Kim S, Kato HE, Kandori H, Katayama K

EMDB-65963:
In situ subtomogram average of 80S ribosome (local refined with LSU mask)
Method: subtomogram averaging / : Yang Q, Huang XJ, Zhang XZ

EMDB-68807:
Cryo-EM structure of human apoferritin at 1.81 Angstrom resolution(using CR-BIS data collection on Falcon4).
Method: single particle / : Yang Q, Huang XJ, Zhang XZ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more