[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 7,070 items for (author: sun & g)


EMDB Unreleased entry

EMDB-66504:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66505:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66506:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66507:
Phage T4 peripheral baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66508:
Phage T4 tip of the tail tube in post-tail-contraction state (genome-empty particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-66675:
Phage T4 protruding part of the tail tube in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3o:
Phage T4 neck in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3p:
Phage T4 sheath in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3q:
Phage T4 inner baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3r:
Phage T4 peripheral baseplate in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9x3s:
Phage T4 tip of the tail tube in post-tail-contraction state (genome-empty particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q

PDB-9xa3:
Phage T4 protruding part of the tail tube in post-tail-contraction state (genome-full particle)
Method: single particle / : Shao Q, Dong J, Wang A, Hu H, Yue J, Li H, Li Y, Zhang Q, Liu J, Sun L, Fokine A, Rao VB, Tao P, Fang Q


EMDB Unreleased entry

EMDB-73558:
Human Sec61 complex bound to coibamide A
Method: single particle / : Park E, Wang L

PDB-9yws:
Human Sec61 complex bound to coibamide A
Method: single particle / : Park E, Wang L


EMDB Unreleased entry

EMDB-65411:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65412:
Human cytosolic ribosome in complex with neomycin, class partially rotated state with E/E-site tRNAs, SERBP1 and eEF2
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65413:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class partially rotated state with E/E-site tRNAs, eEF2 and SERBP1
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65414:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class rotated state with A/A-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65415:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65416:
Human cytosolic ribosome isolated from 3mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65417:
Human cytosolic ribosome isolated from 3mM antibiotic neomycin treated cells, class partially rotated state with E/E-site tRNAs, eEF2 and SERBP1
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65418:
Human cytosolic ribosome isolated from 3mM neomycin treated cells, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65419:
Human cytosolic ribosome in complex with neomycin, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65420:
Large subunit of human mitoribosome isolated from 1mM neomycin treated cells
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65421:
Human mitoribosome isolated from 1mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65422:
Human mitoribosome isolated from 1mM neomycin treated cells, class non rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65423:
Human mitoribosome isolated from 1mM neomycin treated cells, class partially rotated state with A/A-site and P/P-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65424:
Human mitoribosome isolated from 1mM neomycin treated cells, class partially rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65425:
Human mitoribosome isolated from 1mM neomycin treated cells, class rotated state with P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65426:
Human mitoribosome in complex with neomycin, class non rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65427:
Human mitoribosome in complex with neomycin, class partially rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65428:
Human mitoribosome in complex with neomycin, class partially rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65429:
Human mitoribosome in complex with neomycin, class rotated state
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65431:
Human mitoribosome in complex with neomycin, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65433:
Cryo-EM map of the human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65434:
Cryo-EM map of the human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W


EMDB Unreleased entry

EMDB-65395:
Cryo-EM structure of RSV pre-F (strain A2) in complex with Fab 3G12
Method: single particle / : Liu L, Sun P, Li S, Zheng Q, Xia N, Zheng Z

PDB-9vwf:
Cryo-EM structure of RSV pre-F (strain A2) in complex with Fab 3G12
Method: single particle / : Liu L, Sun P, Li S, Zheng Q, Xia N


EMDB Unreleased entry

EMDB-65394:
Cryo-EM structure of RSV pre-F (strain A2) in complex with Fabs 1A2 and 2D10
Method: single particle / : Liu L, Sun P, Li S, Zheng Q, Xia N, Zheng Z

PDB-9vwe:
Cryo-EM structure of RSV pre-F (strain A2) in complex with Fabs 1A2 and 2D10
Method: single particle / : Liu L, Sun P, Li S, Zheng Q, Xia N


EMDB Unreleased entry

EMDB-69566:
The structure of oocytes cytoplasmic lattices
Method: single particle / : Liu Q, Gui M


EMDB Unreleased entry

EMDB-69573:
The high-order structure of CPL filament-consensus map
Method: single particle / : Liu Q, Gui M


EMDB Unreleased entry

EMDB-69578:
The high-order structure of CPL filament-side1 map
Method: single particle / : Liu Q, Gui M


EMDB Unreleased entry

EMDB-69579:
The high-order structure of CPL filament-side2 map
Method: single particle / : Liu Q, Gui M


EMDB Unreleased entry

EMDB-69581:
The high-order structure of CPL filament-dimer2 map
Method: single particle / : Liu Q, Gui M


EMDB Unreleased entry

EMDB-69582:
The high-order structure of CPL filament-dimer1 map
Method: single particle / : Liu Q, Gui M


EMDB Unreleased entry

EMDB-69583:
The high-order structure of CPL filament-stitched map
Method: single particle / : Liu Q, Gui M

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-54410:
Icosahedral reconstruction of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54411:
Chikungunya virus-like particle trimer 1
Method: single particle / : Song X, Kim YC, Huiskonen JT

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more