[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 124 items for (author: stanley & c)

EMDB-52887:
In-situ structure of HIV-1 CA hexamer in NPC
Method: subtomogram averaging / : Zhen H, Peijun Z, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-52888:
In-situ structure of HIV-1 CA hexamer before the nuclear import
Method: subtomogram averaging / : Hou Z, Zhang P, Shen Y, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-52889:
In-situ structure of HIV-1 CA hexamer after the nuclear import
Method: subtomogram averaging / : Hou Z, Zhang P, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-53083:
Cytoplasmic ring structure of the NPC of CEM cells
Method: subtomogram averaging / : Hou Z, Zhang P, Shen Y, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-53084:
Inner ring structure of the NPC of CEM cells
Method: subtomogram averaging / : Hou Z, Zhang P, Shen Y, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-53085:
Luminal ring structure of the NPC of CEM cells
Method: subtomogram averaging / : Hou Z, Zhang P, Shen Y, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-53086:
Nuclear ring structure of the NPC of CEM cells
Method: subtomogram averaging / : Hou Z, Zhang P, Shen Y, Fronik S, Shen J, Shi J, Xu J, Chen L, Hardenbrook N, Thompson C, Neumann S, Engelman A, Aiken C

EMDB-44590:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA with 1 nucleotide bulge
Method: single particle / : Wright ZM, Butay KJ, Krahn JM, Borgnia MJ, Stanley RE

PDB-9bih:
SARS-CoV-2 endoribonuclease Nsp15 bound to dsRNA with 1 nucleotide bulge
Method: single particle / : Wright ZM, Butay KJ, Krahn JM, Borgnia MJ, Stanley RE

EMDB-45464:
Structure of type II-2 alpha-synuclein filament from multiple system atrophy
Method: helical / : Yan NL, Candido F, Tse E, Melo AA, Southworth DR, Merz GE

EMDB-45465:
Structure of type I-2 alpha-synuclein filament from multiple system atrophy
Method: helical / : Yan NL, Candido F, Tse E, Melo AA, Southworth DR, Merz GE

PDB-9cd9:
Structure of type II-2 alpha-synuclein filament from multiple system atrophy
Method: helical / : Yan NL, Candido F, Tse E, Melo AA, Southworth DR, Merz GE

PDB-9cda:
Structure of type I-2 alpha-synuclein filament from multiple system atrophy
Method: helical / : Yan NL, Candido F, Tse E, Melo AA, Southworth DR, Merz GE

EMDB-45005:
Paired Helical Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-45007:
Straight Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-45008:
Paired Helical Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-45009:
Straight Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxi:
Paired Helical Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxo:
Straight Filament of tau amyloids found in Down Syndrome individuals
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxq:
Paired Helical Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

PDB-9bxr:
Straight Filaments purified from Down Syndrome individual brain tissue applied to graphene oxide antibody affinity grids
Method: helical / : Tse E, Ghosh U, Condello C, Southworth D

EMDB-19212:
in situ subtomogram average of MEF cell ribosome in the decoding Z state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19213:
in situ subtomogram average of MEF cell ribosome in the PRE+ Z state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19214:
in situ subtomogram average of MEF cell ribosome in a PRE+ state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19215:
in situ subtomogram average of MEF cell ribosome in a different PRE+ state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19216:
in situ subtomogram average of MEF cell ribosome in the classical PRE state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19217:
in situ subtomogram average of MEF cell ribosome in the rotated 2 state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19218:
in situ subtomogram average of MEF cell ribosome in the rotated 2 + state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19219:
in situ subtomogram average of MEF cell ribosome in a translocation intermediate POSTi state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19220:
in situ subtomogram average of MEF cell ribosome in the POST state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19221:
in situ subtomogram average of low dose anisomycin treated MEF cell ribosome in the OFF-P state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19222:
in situ subtomogram average of MEF cell pre-60S ribosome in the state B
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19223:
in situ subtomogram average of MEF cell idle 60S ribosome complex
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19224:
in situ subtomogram average of MEF cell ribosome associated quality control complex
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19225:
in situ subtomogram average of MEF cell non-empty 60S ribosome complex
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19226:
in situ subtomogram average of MEF cell 40S ribosome
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19227:
in situ subtomogram average of MEF cell 48S initiation complexes
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19228:
in situ subtomogram average of high dose anisomycin treated MEF cell ribosome in PRE+ Z state
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19229:
in situ subtomogram average of an aberrant 40S initiation complex in low dose anisomycin (20 min) treated MEF cell
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19230:
n situ subtomogram average of aberrant initiation complex in arsenite treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19231:
in situ subtomogram average of 43S initiation complex in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19232:
in situ subtomogram average of a subclass of 43S initiation complex in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19233:
in situ subtomogram average of an aberrant 40S initiation complex in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19234:
in situ subtomogram average of an aberrant 40S initiation complex in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19235:
in situ subtomogram average of decoding-like stalled ribosome in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19236:
in situ subtomogram average of PRE-like stalled ribosome in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19237:
in situ subtomogram average of rotated 2 collided ribosome in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19238:
in situ subtomogram average of decoding-like collided ribosome in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19239:
in situ subtomogram average of POSTi-like middle ribosome in helical polysomes in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

EMDB-19240:
in situ subtomogram average of GCN1-bound stalled ribosome in low dose anisomycin treated MEF cells
Method: subtomogram averaging / : Fedry J, Forster F

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more