[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 37 items for (author: sheedlo & mj)

EMDB-48170:
Low Resolution Cryo-EM Map of the Clostridioides difficile Transferase Component B Monomer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48171:
Clostridioides difficile Transferase B Component Dimer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48172:
Clostridioides difficile Transferase B Component Dimer in Complex with the A Component
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48173:
Clostridioides difficile Transferase B Component Trimer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48174:
Clostridioides difficile Transferase B Component Trimer in Complex with the A Component
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48175:
Clostridioides difficile Transferase B Component Tetramer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48176:
Clostridioides difficile Transferase B Component Pentamer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48177:
Clostridioides difficile Transferase B Component Hexamer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-48178:
Clostridioides difficile Transferase B Component Symmetric Heptamer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-44419:
Structure of Clostridioides difficile Component A (50-463) in Complex with a CDTb Oligomer
Method: single particle / : Sheedlo MJ, Mullard RM

EMDB-24004:
Legionella pneumophila Dot/Icm T4SS C1 Reconstruction
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24005:
Legionella pneumophila Dot/Icm T4SS OMC
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24006:
Legionella pneumophila Dot/Icm T4SS PR
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24018:
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 1
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24020:
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 2
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24023:
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 3
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24024:
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 4
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-24026:
Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 5
Method: single particle / : Sheedlo MJ, Durie CL

EMDB-22071:
Legionella pneumophila dDot T4SS OMC
Method: single particle / : Durie CL, Sheedlo MJ

EMDB-22076:
Cryo-EM Structure of the Helicobacter pylori dCag3 OMC
Method: single particle / : Sheedlo MJ, Chung JM

EMDB-22081:
Cryo-EM Structure of the Helicobacter pylori OMC
Method: single particle / : Sheedlo MJ, Chung JM

EMDB-22069:
Legionella pneumophila Dot T4SS PR
Method: single particle / : Durie CL, Sheedlo MJ

EMDB-22070:
Legionella pneumophila Dot/Icm T4SS
Method: single particle / : Durie CL, Sheedlo MJ

EMDB-22077:
Cryo-EM Structure of CagX and CagY within the dCag3 Helicobacter pylori PR
Method: single particle / : Sheedlo MJ, Chung JM

EMDB-22068:
Legionella pneumophila Dot T4SS OMC
Method: single particle / : Durie CL, Sheedlo MJ

EMDB-21016:
Structure of the Clostridioides difficile transferase toxin
Method: single particle / : Sheedlo MJ, Anderson DM

EMDB-0608:
Reconstruction of CDTb Double Heptamer Long Form using C7 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-0609:
Reconstruction of CDTb Double Heptamer Short Form using C7 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-0610:
Reconstruction of CDTb Double Heptamer Short Form using C1 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-20102:
CDTb Pre-Insertion form Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-20103:
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-20104:
CDTb Double Heptamer Long Form Mask 1 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-20105:
CDTb Double Heptamer Long Form Mask 3 Modeled from Cryo-EM Map Reconstructed using C7 Symmetry
Method: single particle / : Lacy DB, Sheedlo MJ

EMDB-20020:
Reconstruction of a T4SS OMCC
Method: single particle / : Chung JM, Sheedlo MJ

EMDB-20021:
PolyAla Model of the PRC from the Type 4 Secretion System of H. pylori
Method: single particle / : Chung JM, Sheedlo MJ

EMDB-20022:
Reconstruction of a T4SS OMCC
Method: single particle / : Chung JM, Sheedlo MJ, Campbell AM, Sawhney N, Frick-Cheng AE, Lacy DB, Cover TL, Ohi MD

EMDB-20023:
Reconstruction of a T4SS OMCC
Method: single particle / : Chung JM, Sheedlo MJ, Campbell AM, Sawhney N, Frick-Cheng AE, Lacy DB, Cover TL, Ohi MD

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more