[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,524 items for (author: sebastian & e)

EMDB-54186:
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54187:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54188:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54189:
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54193:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54204:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54218:
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54219:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-54291:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrf:
TRPC5 apo cryoEM map in the presence of pluronic acid (PA), state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrm:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 1, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrn:
Human TRPC5 in complex with (-) englerin A, full occupancy, state 2, on 290 nm gold foil holes (HexAuFoil)
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rro:
Human TRPC5 in complex with (-) englerin A, full occupancy, intermediary desensitized state
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rrq:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 1
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rru:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 1
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rsg:
Human TRPC5 in complex with (-) englerin A, mixed occupancy_2, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rsh:
Human TRPC5 in complex with (-) englerin A, mixed occupancy, state 2
Method: single particle / : Porav AS, Bon RS, Muench S

PDB-9rvv:
Human TRPC5 in complex with (-) englerin A, partial occupancy (2EA:2LIP stoichiometry) state 2
Method: single particle / : Porav AS, Bon RS, Muench S

EMDB-55720:
Cryo-EM reconstruction for n-Tr20U.
Method: single particle / : Mehta R, Glatt S

EMDB-55721:
Cryo-EM structure of nTr20 tRNA
Method: single particle / : Mehta R, Glatt S

EMDB-54920:
Cryo-EM structure of the catalytic core of human telomerase at the initiation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD, Yu H, Sigurdur TR, Ding Y

EMDB-54921:
Cryo-EM structure of the catalytic core of human telomerase at the elongation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD, Yu H, Sigurdur TR, Ding Y

EMDB-54922:
Cryo-EM structure of the catalytic core of human telomerase at the pre-termination state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD, Yu H, Sigurdur TR, Ding Y

PDB-9shy:
Cryo-EM structure of the catalytic core of human telomerase at the initiation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD

PDB-9shz:
Cryo-EM structure of the catalytic core of human telomerase at the elongation state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD

PDB-9si0:
Cryo-EM structure of the catalytic core of human telomerase at the pre-termination state of the repeat addition cycle
Method: single particle / : Balch S, Franco-Echevarria E, Ghanim GE, Kretsch RC, Das R, Nguyen THD

EMDB-63614:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Z, Hauser AS, Carlsson J

PDB-9m42:
Structure-based discovery of potent agonists of the orphan receptor GPR139
Method: single particle / : Cabezadevaca I, Trapkov B, Shen L, Pezeshki M, Zhang XH, Liu Zj, Hauser AS, Carlsson J

EMDB-54793:
Structure of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54794:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-54795:
Cryo-EM map of focus refined ASB9-Elob/C-CKB bound to Nedd8-CUL5-RBX2-ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54892:
consensus map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB
Method: single particle / : Schulman BA, Du J

EMDB-54893:
Focus refined map of Neddylated CUL5-ARIH2-L3A2-1 bound to ASB9-EloB/C-CKB, focus refined on ARIH2-L3A2-1
Method: single particle / : Schulman BA, Du J

EMDB-54933:
Consensus Map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

EMDB-54934:
Focus refined map of Neddylated CUL5 C-terminal region-RBX2-ARIH2~L3A2-1~Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdx:
Structure of RBR binding E2 variant crosslinked with NEDD8-CUL5-RBX2 bound ARIH2 and Ub
Method: single particle / : Schulman BA, Du J

PDB-9sdy:
Structure of RBR E2 variant binding to CUL5-RBX2 bound ARIH2
Method: single particle / : Schulman BA, Du J

EMDB-55898:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with bound plastocyanin
Method: single particle / : Pietras R, Sarewicz M, Szwalec M, Indyka P, Rawski M, Pintscher S, Mielecki B, Jaciuk M, Koziej L, Glatt S, Osyczka A

PDB-9tgg:
Cryo-EM structure of Spinacia oleracea cytochrome b6f complex with bound plastocyanin
Method: single particle / : Pietras R, Sarewicz M, Szwalec M, Indyka P, Rawski M, Pintscher S, Mielecki B, Jaciuk M, Koziej L, Glatt S, Osyczka A

EMDB-53913:
Consensus reconstruction of the PrPfr hybrid state of the Pseudomonas aeruginosa bacteriophytochrome / PaBphP
Method: single particle / : Bodizs S, Westenhoff S

EMDB-53914:
Focus map on protomer A of the PrPfr hybrid state of the Pseudomonas aeruginosa bacteriophytochrome / PaBphP
Method: single particle / : Bodizs S, Westenhoff S

EMDB-53915:
Focused reconstruction of protomer B of the PrPfr hybrid state of the Pseudomonas aeruginosa bacteriophytochrome / PaBphP
Method: single particle / : Bodizs S, Westenhoff S

EMDB-53068:
Cryo-EM map of P. furiosus 70S grown at 95 degrees
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53069:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53070:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53071:
Cryo-EM map of P. furiosus 70S grown at 95 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53072:
Consensus cryo-EM map of P furiosus 70S grown at 102degC
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53073:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the lsu
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53074:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu body
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

EMDB-53076:
Cryo-EM map of P. furiosus 70S grown at 102 degC, focused on the ssu head
Method: single particle / : Matzov D, Georgeson J, Westhof E, Schwartz S, Shalev-Benami M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more