[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 71 items for (author: rovsnik & u)

EMDB-52235:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (consensus)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52252:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU body)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52256:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU head)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52257:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on the LSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52270:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (focused on Aep1-Aep2-Atp25)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52276:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on Aep3)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52277:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (consensus map)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52278:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52279:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the SSU head)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52280:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome (focused on the LSU)
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52281:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-52283:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

PDB-9hlz:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

PDB-9hm0:
Translational activator Aep3 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Carlstrom A, Rovsnik U, Ott M

EMDB-48387:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome
Method: single particle / : Sherpa D, Shao S

EMDB-48388:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (Small ribosomal subunit)
Method: single particle / : Sherpa D, Shao S

EMDB-48390:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (large ribosomal subunit)
Method: single particle / : Sherpa D, Shao S

EMDB-48700:
Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome (composite map SSU and Aep1-Aep2-Atp25 complex)
Method: single particle / : Sherpa D, Shao S

EMDB-51109:
Mouse mitochondrial DNA polymerase gamma ternary complex in replication conformer
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51110:
Mouse mitochondrial DNA polymerase gamma ternary complex in intermediate conformer
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51111:
Mouse mitochondrial DNA polymerase gamma ternary complex in error-editing conformer (consensus map)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51112:
Mouse mitochondrial DNA polymerase gamma ternary complex in error-editing conformer (Local refinement map of subunit A and DNA)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51113:
Mouse mitochondrial DNA polymerase gamma ternary complex in error-editing conformer (local refinement of subunit B)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-51114:
Mouse mitochondrial DNA polymerase gamma ternary complex in error-editing conformer
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52815:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in replication conformer
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52816:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in human-like error-editing conformer (consensus map)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52817:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in human-like error-editing conformer (local refinement map of subunit A and DNA)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52818:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in human-like error-editing conformer (local refinement map of subunit B)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52819:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in human-like error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52820:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in mouse-like error-editing conformer (consensus map)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52821:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in mouse-like error-editing conformer (local refinement map of subunit A and DNA)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52822:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in mouse-like error-editing conformer (local refinement map of subunit B)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52823:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in mouse-like error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52824:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in replication conformer
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52825:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in mouse-like error-editing conformer (consensus map)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52826:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in mouse-like error-editing conformer (local refinement map of subunit A and DNA)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52827:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in mouse-like error-editing conformer (local refinement map of subunit B)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-52828:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in mouse-like error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9g74:
Mouse mitochondrial DNA polymerase gamma ternary complex in replication conformer
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9g75:
Mouse mitochondrial DNA polymerase gamma ternary complex in intermediate conformer
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9g77:
Mouse mitochondrial DNA polymerase gamma ternary complex in error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ibx:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in replication conformer
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ibz:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in human-like error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ic0:
Chimeric mitochondrial DNA polymerase gamma ternary complex (mAhB) in mouse-like error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ic1:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in replication conformer
Method: single particle / : Valenzuela S, Falkenberg M

PDB-9ic3:
Chimeric mitochondrial DNA polymerase gamma ternary complex (hAmB) in mouse-like error-editing conformer (composite)
Method: single particle / : Valenzuela S, Falkenberg M

EMDB-50744:
Closed conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10 mM Ca2+
Method: single particle / : Rovsnik U, Anden O, Lycksell M, Delarue M, Howard RJ, Lindahl E

EMDB-50745:
Open conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10mM Ca2+
Method: single particle / : Rovsnik U, Anden O, Lycksell M, Delarue M, Howard RJ, Lindahl E

EMDB-50746:
Open conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10mM EDTA
Method: single particle / : Rovsnik U, Anden O, Lycksell M, Delarue M, Howard RJ, Lindahl E

EMDB-50747:
Closed and disordered conformation of the pentameric ligand-gated ion channel, DeCLIC at pH 5 with 10mM EDTA
Method: single particle / : Rovsnik U, Anden O, Lycksell M, Delarue M, Howard RJ, Lindahl E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more