[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 715 items for (author: rice & w)

EMDB-53206:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53207:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53208:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53209:
GABA-A receptor a2b3 (1:4) + a2NB16(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53212:
GABA-A receptor a2b3 (1:4) + a2NB47(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53213:
GABA-A receptor a2b3g2 + a2NB00(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53214:
GABA-A receptor a2b3g2 + a2NB04(silent) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53215:
GABA-A receptor a2b3g2 + a2NB25(inhibitor)
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-53216:
GABA-A receptor a2b3 (1:4) + a2NB06(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

EMDB-56081:
GABA-A receptor a3b3g2 + a3NB77 + bicuculline
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-56094:
GABA-A receptor a3b3g2 + GABA-PRE + a3NB83
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-56109:
GABA-A receptor a3b3g2 + a3NB77 + GABA
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9qjp:
GABA-A receptor a3b3g2 + a3NB83(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjq:
GABA-A receptor a3b3 (1:4) + a3NB77(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjr:
GABA-A receptor a2b3 (1:4) + a2NB29(near-silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjs:
GABA-A receptor a2b3 (1:4) + a2NB16(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjv:
GABA-A receptor a2b3 (1:4) + a2NB47(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjx:
GABA-A receptor a2b3g2 + a2NB00(PAM) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qjy:
GABA-A receptor a2b3g2 + a2NB04(silent) + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qk0:
GABA-A receptor a2b3g2 + a2NB25(inhibitor)
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9qk1:
GABA-A receptor a2b3 (1:4) + a2NB06(silent) + b3Mb125 + GABA
Method: single particle / : Miller PS, Gonzalez-Prada JE

PDB-9tnb:
GABA-A receptor a3b3g2 + a3NB77 + bicuculline
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9tns:
GABA-A receptor a3b3g2 + GABA-PRE + a3NB83
Method: single particle / : Shang C, Nestorow SA, Miller PS

PDB-9tpq:
GABA-A receptor a3b3g2 + a3NB77 + GABA
Method: single particle / : Shang C, Nestorow SA, Miller PS

EMDB-73688:
Cryo-EM structure of VVD-908 NLRP3 complex
Method: single particle / : Bernard SM

PDB-9z03:
Cryo-EM structure of VVD-908 NLRP3 complex
Method: single particle / : Bernard SM

EMDB-55134:
P. abyssi hibernation factor Hib bound to ATP (Hib-PTC conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55140:
Cryo-EM structure of the N-terminal domain of Hib bound to the L1 stalk of Pyrococcus abyssi 70S
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sr9:
P. abyssi hibernation factor Hib bound to ATP (Hib-PTC conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srf:
Cryo-EM structure of the N-terminal domain of Hib bound to the L1 stalk of Pyrococcus abyssi 70S
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-58071:
Structure of the NaCT-Na-PF2 complex
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

EMDB-58072:
Structure of NaCT in NaCl
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

EMDB-58073:
Structure of NaCT in Choline Chloride
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

PDB-30ut:
Structure of the NaCT-Na-PF2 complex
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

PDB-30uu:
Structure of NaCT in NaCl
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

PDB-30uv:
Structure of NaCT in Choline Chloride
Method: single particle / : Sauer DB, Song J, Marden JJ, Wang B, Rice WJ, Wang DN

EMDB-55135:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55136:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55137:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55139:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55636:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sra:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srb:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9src:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sre:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9t7h:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-72260:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.047, RP.057 and RP.035
Method: single particle / : Barrett JR, Ward AB

EMDB-72265:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.093, RP.073 and RP.063
Method: single particle / : Barrett JR, Ward AB

EMDB-72294:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.092 and RP.052
Method: single particle / : Barrett JR, Ward AB

PDB-9q69:
Cryo-electron microscopy structure of PfRIPR bound to monoclonal antibodies RP.047, RP.057 and RP.035
Method: single particle / : Barrett JR, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more