[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 220 items for (author: reyes & n)

EMDB-72552:
attLsym bound serine integrase complex in the dimeric state
Method: single particle / : Shin H, Pigli Y, Pena Reyes T, Fuller JR, Olorunniji FJ, Rice PA

EMDB-72632:
attPsym bound large serine integrase and RDF complex in the dimeric state
Method: single particle / : Shin H, Olorunniji FJ, Rice PA

PDB-9y66:
attLsym bound serine integrase complex in the dimeric state
Method: single particle / : Shin H, Pigli Y, Pena Reyes T, Fuller JR, Olorunniji FJ, Rice PA

PDB-9y6v:
attPsym bound large serine integrase and RDF complex in the dimeric state
Method: single particle / : Shin H, Olorunniji FJ, Rice PA

EMDB-50436:
Cryo-EM Structure of Amyloid-beta Fibrils from Mouse Brain Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50437:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 1
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50438:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 2
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50439:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 3
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50440:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 4
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50441:
Cryo-EM Structure of Tau Filaments from Individuals Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-50442:
Cryo-EM Structure of Amyloid-beta Fibrils from Individual Carrying the Uppsala AbetaUpp(1-42)delta(19-24) mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh1:
Cryo-EM Structure of Amyloid-beta Fibrils from Mouse Brain Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh2:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 1
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh3:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 2
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh4:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 3
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh5:
Cryo-EM Structure of Amyloid-beta Fibrils Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation - Polymorph 4
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

PDB-9fh6:
Cryo-EM Structure of Tau Filaments from Individuals Carrying the Uppsala AbetaUpp(1-42)delta(19-24) Mutation
Method: helical / : Zielinski M, Peralta Reyes FS, Gremer L, Pagnon de la Vega M, Roeder C, Heidler TV, Syvaenen S, Willbold D, Sehlin D, Ingelsson M, Schroeder GF

EMDB-43148:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43149:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43150:
Human monoclonal antibody C7 targeting HB3VAR03 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-44539:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdf:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdg:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

PDB-9bhb:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-51452:
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
Method: single particle / : Bothe A, Ban N, Kostova K

PDB-9gmo:
eIF6-bound pre-60S large ribosomal subunit incorporating mutant uL16
Method: single particle / : Bothe A, Ban N, Kostova K

EMDB-41049:
Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
Method: single particle / : Bhattacharjee S, Gottesman ME, Frank J

EMDB-41050:
Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
Method: single particle / : Bhattacharjee S, Gottesman ME, Frank J

PDB-8t5d:
Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
Method: single particle / : Bhattacharjee S, Gottesman ME, Frank J

PDB-8t5h:
Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
Method: single particle / : Bhattacharjee S, Gottesman ME, Frank J

EMDB-44200:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 1
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44201:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 2
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44202:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 3
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44203:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 4
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44204:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 5
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44205:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 6
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44206:
Ubiquitin E2-Ub-E3 HECT tetrahedral transthiolation intermediate mimic - state 7
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44207:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - consensus map and model
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44208:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 1 map and model from consensus
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44209:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 10 map and model from consensus
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44210:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 1 map and model (Ub(A)/ATP/Mg)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44211:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 2 map and model (Ub(A)/ATP/Mg)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44212:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 3 map and model (Ub(A)-AMP/PPi/Mg)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44213:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 4 map and model (Ub(A)-AMP/PPi/Mg)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44214:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 5 map and model (Ub(A)-AMP)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44215:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 1 map and model from cluster 1 (Ub(A)/ATP/Mg)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44216:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 10 map and model from cluster 5 (Ub(A)-AMP)
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44217:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - consensus map and model
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44218:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 1 map and model from consensus
Method: single particle / : Kochanczyk T, Lima CD

EMDB-44219:
Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (singly Ub-loaded) - Ub(T) class 10 map and model from consensus
Method: single particle / : Kochanczyk T, Lima CD

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more