[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 68 items for (author: reta & s)

EMDB-19986:
Structure of recombinant alpha-synuclein fibrils 1B capable of seeding GCIs in vivo
Method: helical / : Burger D, Kashyrina M, Lewis A, De Nuccio F, Mohammed I, de La Seigliere H, van den Heuvel L, Feuillie C, Verchere J, Berbon M, Arotcarena M, Retailleau A, Bezard E, Laferriere F, Loquet A, Bousset L, Baron T, Lofrumento DD, De Giorgi F, Stahlberg H, Ichas F

PDB-9euu:
Structure of recombinant alpha-synuclein fibrils 1B capable of seeding GCIs in vivo
Method: helical / : Burger D, Kashyrina M, Lewis A, De Nuccio F, Mohammed I, de La Seigliere H, van den Heuvel L, Feuillie C, Verchere J, Berbon M, Arotcarena M, Retailleau A, Bezard E, Laferriere F, Loquet A, Bousset L, Baron T, Lofrumento DD, De Giorgi F, Stahlberg H, Ichas F

EMDB-17757:
Cryo-EM structure of the Cas12m-crRNA-target DNA complex
Method: single particle / : Sasnauskas G, Tamulaitiene G, Karvelis T, Bigelyte G, Siksnys V

PDB-8pm4:
Cryo-EM structure of the Cas12m-crRNA-target DNA complex
Method: single particle / : Sasnauskas G, Tamulaitiene G, Karvelis T, Bigelyte G, Siksnys V

EMDB-29046:
Wildtype rat TRPV2 in nanodiscs bound to RR
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

EMDB-29047:
Wildtype rat TRPV2 in nanodiscs bound to RR and 2-APB
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

EMDB-29048:
RR-bound wildtype rabbit TRPV5 in nanodiscs
Method: single particle / : Fluck EC, De Jesus-Perez JJ, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

EMDB-29051:
Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red
Method: single particle / : De Jesus-Perez JJ, Fluck EC, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

PDB-8ffl:
Wildtype rat TRPV2 in nanodiscs bound to RR
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

PDB-8ffm:
Wildtype rat TRPV2 in nanodiscs bound to RR and 2-APB
Method: single particle / : Pumroy RA, Protopopova AD, Rocereta JA, De Jesus-Perez JJ, Fluck EC, Moiseenkova-Bell VY

PDB-8ffn:
RR-bound wildtype rabbit TRPV5 in nanodiscs
Method: single particle / : Fluck EC, De Jesus-Perez JJ, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

PDB-8ffq:
Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red
Method: single particle / : De Jesus-Perez JJ, Fluck EC, Pumroy RA, Protopopova AD, Rocereta JA, Moiseenkova-Bell VY

EMDB-41623:
Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (engaged state)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41647:
Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (open state)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41648:
Cryo-EM structure of CPD stalled 10-subunit Pol II in complex with Rad26
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41650:
Cryo-EM structure of backtracked Pol II in complex with Rad26
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41652:
Cryo-EM structure of backtracked Pol II
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41653:
Cryo-EM structure of CPD-stalled Pol II (conformation 1)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41654:
Cryo-EM structure of CPD-stalled Pol II (Conformation 2)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-41655:
Cryo-EM structure of CPD lesion containing RNA Polymerase II elongation complex with Rad26 and Elf1 (closed state)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tug:
Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (engaged state)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvp:
Cryo-EM structure of CPD-stalled Pol II in complex with Rad26 (open state)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvq:
Cryo-EM structure of CPD stalled 10-subunit Pol II in complex with Rad26
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvs:
Cryo-EM structure of backtracked Pol II in complex with Rad26
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvv:
Cryo-EM structure of backtracked Pol II
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvw:
Cryo-EM structure of CPD-stalled Pol II (conformation 1)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvx:
Cryo-EM structure of CPD-stalled Pol II (Conformation 2)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

PDB-8tvy:
Cryo-EM structure of CPD lesion containing RNA Polymerase II elongation complex with Rad26 and Elf1 (closed state)
Method: single particle / : Sarsam RD, Lahiri I, Leschziner AE

EMDB-36751:
Outward_facing SLC15A4 monomer
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-36752:
Outward-facing SLC15A4 dimer
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-36753:
SLC15A4_TASL complex
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-36754:
SLC15A4 inhibitor complex
Method: single particle / : Zhang SS, Chen XD, Xie M

EMDB-41111:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

PDB-8t9h:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41109:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41113:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41259:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-41272:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

PDB-8t9f:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

PDB-8thu:
Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1
Method: single particle / : Abini-Agbomson S, Armache KJ

EMDB-40789:
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI, Armache KJ

EMDB-40790:
Map focused on acidic patch BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI

EMDB-40791:
Overall map of BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI

PDB-8svf:
BAP1/ASXL1 bound to the H2AK119Ub Nucleosome
Method: single particle / : Thomas JF, Valencia-Sanchez MI, Armache KJ

EMDB-16803:
AP2 bound to MSP1 nanodisc with Tgn38 cargo peptide
Method: single particle / : Baker RW, Sarsam R, Cannon KS

EMDB-16804:
AP2 bound to MSP1E3D1 nanodisc with Tgn38 cargo peptide
Method: single particle / : Baker RW, Sarsam R, Cannon KS

EMDB-29977:
AP2 bound to an MSP1 nanodisc
Method: single particle / : Sarsam RD, Cannon KS, Baker RW

EMDB-40034:
Structure of AP2 bound to MSP1E3D1 nanodisc
Method: single particle / : Sarsam RD, Cannon KS, Baker RW

EMDB-40035:
Structure of AP2 bound to MSP2N2 nanodisc
Method: single particle / : Sarsam RD, Cannon KS, Baker RW

EMDB-40963:
AP2 bound to MSP2N2 nanodisc with Tgn38 cargo peptide; focused refinement 1
Method: single particle / : Baker RW, Sarsam R, Cannon KS

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more