[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 27 items for (author: ortlund & e)

EMDB-29950:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10
Method: single particle / : Patel A, Ortlund EA

EMDB-29975:
Overall map of SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10
Method: single particle / : Patel A, Ortlund EA

EMDB-40007:
Local map of SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10
Method: single particle / : Patel A, Ortlund EA

PDB-8gdr:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21B10
Method: single particle / : Patel A, Ortlund EA

EMDB-28913:
SARS-CoV-2 spike glycoprotein trimer bound with two nanobodies
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28914:
SARS-CoV-2 spike glycoprotein trimer bound with two nanobodies (locally-refined)
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28931:
SARS-CoV-2 spike glycoprotein trimer with nanobody bound to RBD in the "up" conformation (locally-refined)
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28930:
SARS-CoV-2 spike glycoprotein trimer with nanobody bound to RBD in "up" conformation
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28868:
Overall, original map of SARS-CoV-2 spike glycoprotein trimer with RBDs in the down conformation with nanobody attached to two RBDs.
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28880:
Locally refined map of SARS-CoV-2 spike glycoprotein trimer with nanobody bound to two RBDs
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28856:
SARS-CoV-2 spike protein trimer (down conformation) bound with a nanobody
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

PDB-8f4p:
SARS-CoV-2 spike protein trimer (down conformation) bound with a nanobody
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28688:
SARS-CoV-2 spike protein bound with a nanobody
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

PDB-8eyh:
SARS-CoV-2 spike protein bound with a nanobody
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-28686:
SARS-CoV-2 spike protein complexed with two nanobodies
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

PDB-8eyg:
SARS-CoV-2 spike protein complexed with two nanobodies
Method: single particle / : Laughlin ZT, Patel A, Ortlund EA

EMDB-26656:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 034_32
Method: single particle / : Patel A, Ortlund E

PDB-7uow:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 034_32
Method: single particle / : Patel A, Ortlund E

EMDB-26263:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02
Method: single particle / : Patel A, Ortlund E

EMDB-26267:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-13
Method: single particle / : Patel A, Ortlund E

PDB-7u0q:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-02
Method: single particle / : Patel A, Ortlund E

PDB-7u0x:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-13
Method: single particle / : Patel A, Ortlund E

EMDB-26262:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

EMDB-26669:
SARS-Cov2 Omicron varient S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

PDB-7u0p:
SARS-Cov2 S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

PDB-7upl:
SARS-Cov2 Omicron varient S protein structure in complex with neutralizing monoclonal antibody 002-S21F2
Method: single particle / : Patel A, Ortlund E

EMDB-21414:
Trimeric Complex of Them1 Negative Stain Map
Method: single particle / : Tillman MC, Imai N, Li Y, Khadka M, Okafor CD, Juneja P, Adhiyaman A, Hagen SJ, Cohen DE, Ortlund EA

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more