[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 23 items for (author: ngo & mk)

EMDB-64764:
Cryo-EM structure of DICER/26S-GU complex in dicing state
Method: single particle / : Ngo MK

EMDB-64765:
Cryo-EM structure of DICER/26S-UG complex in dicing state
Method: single particle / : Ngo MK

EMDB-67570:
Cryo-EM structure of DICER with pre-mir-517a-GU in pre-dicing state
Method: single particle / : Ngo MK

EMDB-67573:
Cryo-EM structure of DICER with pre-mir-517a-GU in dicing state
Method: single particle / : Ngo MK

EMDB-67575:
Cryo-EM structure of DICER-D991G-H992G/26S-GU complex in dicing state
Method: single particle / : Ngo MK

EMDB-50173:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Method: single particle / : Bernhard H, Dolce LG, Kowalinski E

EMDB-50217:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Method: single particle / : Bernhard H, Warminski M, Dolce LG, Kowalinski E

PDB-9f3f:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap0
Method: single particle / : Bernhard H, Dolce LG, Kowalinski E

PDB-9f67:
Trypanosoma brucei nuclear cap-binding complex (CBC) bound to cap4
Method: single particle / : Bernhard H, Warminski M, Dolce LG, Kowalinski E

EMDB-50615:
Structure of a gp140 SpyTag-SpyCatcher mi3 nanoparticle including mi3 density only.
Method: single particle / : Woodward JD, Malebo K, Chapman R

EMDB-50635:
Unmasked HIV-1 envelope trimer gp140 SpyTag SpyCatcher mi3 nanoparticle.
Method: single particle / : Woodward JD, Malebo K, Chapman R

PDB-9fo3:
Structure of a gp140 SpyTag-SpyCatcher mi3 nanoparticle including mi3 density only.
Method: single particle / : Woodward JD, Malebo K, Chapman R

EMDB-25606:
Zika Virus particle bound with IgM antibody DH1017 Fab fragment
Method: single particle / : Miller AS, Kuhn RJ

PDB-7t17:
Zika Virus asymmetric unit bound with IgM antibody DH1017 Fab fragment
Method: single particle / : Miller AS, Kuhn RJ

EMDB-22995:
Spike protein trimer
Method: single particle / : Asarnow D, Faust B, Bohn M, Bulkley D, Manglik A, Craik CS, Cheng Y

EMDB-22993:
SARS-CoV-2 spike glycoprotein:Fab 5A6 complex I
Method: single particle / : Asarnow D, Charles C, Cheng Y

EMDB-22994:
SARS-CoV-2 Spike protein in complex with Fab 2H4
Method: single particle / : Asarnow D, Charles C, Cheng Y

EMDB-22997:
SARS-CoV-2 spike glycoprotein:Fab 3D11 complex
Method: single particle / : Asarnow D, Charles C, Cheng Y

EMDB-23707:
SARS-CoV-2 Spike:5A6 Fab complex I focused refinement
Method: single particle / : Asarnow D, Cheng Y

EMDB-23709:
SARS-CoV-2 Spike:Fab 3D11 complex focused refinement
Method: single particle / : Asarnow D, Cheng Y

EMDB-3601:
Cryo EM structure of the conjugative relaxes TraI of the F/R1 plasmid system
Method: single particle / : Zanetti G, Ilangovan A, Waksman G

PDB-5n8o:
Cryo EM structure of the conjugative relaxase TraI of the F/R1 plasmid system
Method: single particle / : Ilangovan A, Zanetti G, Waksman G

EMDB-5856:
Negative stain reconstruction of HIV envelope glycoprotein BG505 SOSIP.664 in complex with CAP256-VRC26.09 Fab
Method: single particle / : Ward AB, Kim HJ

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more