[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 71 items for (author: mohapatra & a)

EMDB-60751:
Cryo-EM structure of ClpB1 heptamer from Oryza sativa

PDB-9ip0:
Cryo-EM structure of ClpB1 heptamer from Oryza sativa

EMDB-38743:
Structure of CXCR2 bound to CXCL1 (CXCR2-CXCL1-Go Full map)

PDB-8xwv:
Structure of CXCR2 bound to CXCL1 (CXCR2-CXCL1-Go Full map)

EMDB-38719:
Structure of CXCR2 bound to CXCL2 (Ligand-receptor focused map)

EMDB-38732:
Structure of CXCR2 bound to CXCL1 (Ligand-receptor focused map)

EMDB-38734:
Structure of CXCR2 bound to CXCL3 (Ligand-receptor focused map)

EMDB-38738:
Structure of CXCR2 bound to CXCL6 (Ligand-receptor focused map)

EMDB-38739:
Structure of CXCR2 bound to CXCL8 (Ligand-receptor focused map)

EMDB-38742:
Structure of CXCR2 bound to CXCL5 (Ligand-receptor focused map)

EMDB-38744:
Structure of CXCR2 bound to CXCL3 (CXCR2-CXCL3-Go Full map)

EMDB-38747:
Structure of CXCR2 bound to CXCL8 (CXCR2-CXCL8-Go Full map)

EMDB-38748:
Structure of CXCR2 bound to CXCL5 (CXCR2-CXCL5-Go Full map)

EMDB-38749:
Structure of CXCR2 bound to CXCL2 (CXCR2-CXCL2-Go Full map)

EMDB-38759:
Structure of CXCR2 bound to CXCL6 (CXCR2-CXCL6-Go Full map)

EMDB-38764:
Structure of CXCR2 bound to CXCL6 (Composite map)

PDB-8xvu:
Structure of CXCR2 bound to CXCL2 (Ligand-receptor focused map)

PDB-8xwa:
Structure of CXCR2 bound to CXCL1 (Ligand-receptor focused map)

PDB-8xwf:
Structure of CXCR2 bound to CXCL3 (Ligand-receptor focused map)

PDB-8xwm:
Structure of CXCR2 bound to CXCL6 (Ligand-receptor focused map)

PDB-8xwn:
Structure of CXCR2 bound to CXCL8 (Ligand-receptor focused map)

PDB-8xws:
Structure of CXCR2 bound to CXCL5 (Ligand-receptor focused map)

PDB-8xx3:
Structure of CXCR2 bound to CXCL3 (CXCR2-CXCL3-Go Full map)

PDB-8xx6:
Structure of CXCR2 bound to CXCL8 (CXCR2-CXCL8-Go Full map)

PDB-8xx7:
Structure of CXCR2 bound to CXCL5 (CXCR2-CXCL5-Go Full map)

PDB-8xxh:
Structure of CXCR2 bound to CXCL2 (CXCR2-CXCL2-Go Full map)

PDB-8xxr:
Structure of CXCR2 bound to CXCL6 (CXCR2-CXCL6-Go Full map)

PDB-8xxx:
Structure of CXCR2 bound to CXCL6 (Composite map)

EMDB-39546:
SARS-CoV-2 Delta Spike in complex with JL-8C

EMDB-39547:
SARS-CoV-2 Delta Spike in complex with JM-1A

EMDB-39685:
SARS-CoV-2 Delta Spike in complex with Fab of JE-5C

EMDB-39686:
SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B

PDB-8yro:
SARS-CoV-2 Delta Spike in complex with JL-8C

PDB-8yrp:
SARS-CoV-2 Delta Spike in complex with JM-1A

PDB-8yz5:
SARS-CoV-2 Delta Spike in complex with Fab of JE-5C

PDB-8yz6:
SARS-CoV-2 Spike (BA.1) in complex with Fab of JH-8B

EMDB-34943:
Structure of C5a-pep bound mouse C5aR1 in complex with Go

EMDB-34947:
Structure of a GPCR-G protein in complex with a natural peptide agonist

EMDB-35257:
Structure of EP54-C3aR-Go complex

EMDB-35259:
Structure of Apo-C3aR-Go complex (Glacios)

EMDB-35263:
Structure of EP54-C3aR-Gq complex

EMDB-35275:
Structure of C3a-C3aR-Go complex (Composite map)

EMDB-35282:
Structure of Apo-C3aR-Go complex (Titan)

EMDB-35292:
Structure of C5a bound human C5aR1 in complex with Go (Composite map)

EMDB-35293:
C3a-C3aR-Go (C3aR-Go complex only, Original Map)

EMDB-35294:
C3a-C3aR-Go (C3a only, Original Map)

EMDB-35295:
C5a-hC5aR1-Go (hC5aR1-Go complex only, Original map)

EMDB-35296:
C5a-hC5aR1-Go complex (C5a only, Original map)

EMDB-36001:
Structure of EP141-C3aR-Go complex

EMDB-36755:
Structure of human C5a-desArg bound human C5aR1 in complex with Go

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more