[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,357 items for (author: liang & p)

EMDB-69160:
YghJ protein zymogen-like autoinhibited state
Method: single particle / : Gu JK, Zhang MH

EMDB-69161:
N-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

EMDB-69162:
C-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

PDB-23px:
YghJ protein zymogen-like autoinhibited state
Method: single particle / : Gu JK, Zhang MH

PDB-23py:
N-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

PDB-23pz:
C-His tagged YghJ protein substrate-accessible state
Method: single particle / : Gu JK, Zhang MH

EMDB-76291:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

PDB-12bp:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

EMDB-48771:
Cryo-EM Structure of Apo SeAvs7
Method: single particle / : Zhang J, Feng L

EMDB-48772:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex
Method: single particle / : Zhang J, Feng L

EMDB-73001:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex
Method: single particle / : Zhang J, Feng L

EMDB-73002:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex-Map B
Method: single particle / : Zhang J, Feng L

EMDB-73003:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex -Map A
Method: single particle / : Zhang J, Feng L

EMDB-73004:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map E
Method: single particle / : Zhang J, Feng L

EMDB-73005:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map D
Method: single particle / : Zhang J, Feng L

EMDB-73006:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex-Map C
Method: single particle / : Zhang J, Feng L

PDB-9n00:
Cryo-EM Structure of Apo SeAvs7
Method: single particle / : Zhang J, Feng L

PDB-9n01:
Cryo-EM structure of SeAvs7 MCP EFTu1 monomeric complex
Method: single particle / : Zhang J, Feng L

PDB-9yix:
Cryo-EM structure of SeAvs7 MCP EFTu1 tetrameric complex
Method: single particle / : Zhang J, Feng L

EMDB-66624:
Structure of hemagglutinin from influenza A virions determined by sub-tomogram averaging
Method: subtomogram averaging / : Zhang Z, Chen Y

EMDB-68781:
In situ cryo sub-tomogram average of axoneme in sperm flagella from Rgs22 knockout mice
Method: subtomogram averaging / : Ye-Jun P

EMDB-68387:
Perinereis linea erythrocruorin
Method: single particle / : Deng JX, Jiang YL, Zhou CZ

PDB-22jw:
Perinereis linea erythrocruorin
Method: single particle / : Deng JX, Jiang YL, Zhou CZ

EMDB-66002:
Subtomogram averaging of SARS-CoV-2 spike-P17-IgG Gemini structure
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66003:
Subtomogram averaging of SARS-CoV-2 spike-P17-IgG solo structure
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66004:
Subtomogram averaging of spike-P17-IgG solo structure on fixed SARS-CoV-2
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66005:
Subtomogram averaging of SARS-CoV-2 spike-S309-IgG Gemini structure
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66006:
Subtomogram averaging of SARS-CoV-2 spike-S309-IgG solo structure in 1-RBD-up conformation
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-66007:
Subtomogram averaging of SARS-CoV-2 spike-S309-IgG solo structure in closed conformation
Method: subtomogram averaging / : Song Y, Huang Q, Li S

EMDB-68782:
In situ cryo sub-tomogram average of the ciliary axoneme from Rgs22 knockout mouse ependymal progenitor cells
Method: subtomogram averaging / : Ye-Jun P

EMDB-80106:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

PDB-25ho:
Cryo-EM structure of the Helicobacter pylori ferritin-I69C
Method: single particle / : Wang N, Liu Y, Shan J, Rao H, Ma X, Li Y

EMDB-65314:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

EMDB-65343:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

PDB-9vt4:
EBOV GP/BA2-VHH complex
Method: single particle / : Wang M, Gao Y, Jin T

PDB-9vts:
EBOV GP/1A10-VHH complex
Method: single particle / : Wang M, Gong P, Jin T

EMDB-63485:
The consensus map of HBx-Smc5/6 ubiquitination complex
Method: single particle / : Tong C, Lili D, Hongshuai L, Jinhong Z, Qian X, Lanfeng W

EMDB-48326:
Cryo-EM structure of human CD33 bound to 15G15.3 Fab
Method: single particle / : Puno MR, Azumaya C

EMDB-76493:
SARS-CoV-2 BA.3.2.1 Spike with N529Q mutation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76501:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 Spike with K852A mutation, closed conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76694:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, flexible conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76706:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with N529Q mutation, flexible conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76713:
Local refinement of RBDA, RBDC, and NTDB of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, closed conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76849:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, open conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76850:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 spike with N529Q mutation, open conformation
Method: single particle / : Wang Y, Hu Y, Xie X

EMDB-76936:
Local refinement of the RBD and NTD in the closed BA.3.2.1 spike with N529Q mutant
Method: single particle / : Wang Y, Hu Y, Xie X

PDB-12jt:
SARS-CoV-2 BA.3.2.1 Spike with N529Q mutation
Method: single particle / : Wang Y, Hu Y, Xie X

PDB-12jz:
Cryo-EM structure of SARS-CoV-2 BA.3.2.1 Spike with K852A mutation, closed conformation
Method: single particle / : Wang Y, Hu Y, Xie X

PDB-12rp:
Local refinement of RBDA, RBDC, and NTDB of SARS-CoV-2 BA.3.2.1 spike with K852A mutation, closed conformation
Method: single particle / : Wang Y, Hu Y, Xie X

PDB-13bd:
Local refinement of the RBD and NTD in the closed BA.3.2.1 spike with N529Q mutant
Method: single particle / : Wang Y, Hu Y, Xie X

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more