[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 43,121 items for (author: li & w)

EMDB-68938:
Tail tip assembly of phage Oekolampad (Bas18)
Method: single particle / : Kumaran R, Bostina M

EMDB-74964:
Icosahedral Capsid assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Harry M, Mike S, Mihnea B

EMDB-75103:
C12 Portal assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Mihnea B

EMDB-75266:
C6 Neck assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Mihnea B

EMDB-75516:
C6 Tail assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Mihnea B

PDB-10ec:
C12 Portal assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Mihnea B

PDB-10lj:
C6 Neck assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Mihnea B

PDB-10xw:
C6 Tail assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Mihnea B

PDB-23gd:
Tail tip assembly of phage Oekolampad (Bas18)
Method: single particle / : Kumaran R, Bostina M

PDB-9zys:
Icosahedral Capsid assembly of phage Oekolampad (Bas18)
Method: single particle / : Rosheny K, Harry M, Mike S, Mihnea B

EMDB-76463:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76464:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-76465:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iy:
Locally refined cryo-EM structure of human cannabinoid receptor 2 with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12iz:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '5249
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

PDB-12ja:
Cryo-EM structure of human cannabinoid receptor 2-Gi complex with agonist '1029
Method: single particle / : Sacco M, Wu C, Singal B, Skiniotis G

EMDB-57240:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

PDB-29km:
Cryo-EM structure of Bacillus subtilis DnaB
Method: single particle / : Campoy RR, Guyet A, Pelliciari S, Murray H, Ilangovan A

EMDB-73877:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73882:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-73883:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7q:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to a crRNA
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7v:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

PDB-9z7x:
Cryo-EM Structure of the Type III-Bv CRISPR Complex from Dissulfurispira thermophila bound to target RNA with non-complementary PFS
Method: single particle / : Burman N, Pandey S, Wiedenheft B

EMDB-72526:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

PDB-9y61:
Cryo-EM structure of ternary complex NSD2-PWWP1:CRBN:DDB1 in complex with NSD2-LDD, an LDD degrader
Method: single particle / : Zhu J, Pagarigan BE, Fang W

EMDB-77085:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77086:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (full dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77087:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from plunge freezing (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-77088:
Characterization standard for in-situ cryo-electron tomography: structure of PP7 virus-like-particle in E. coli from high-pressure freezing and FIB-milling (partial dataset)
Method: subtomogram averaging / : Ali M, Hutchings J, Montabana EA, Schwartz J, Kopylov M, Paraan M

EMDB-65914:
Cryo-EM structure of RNF170-Erlin1-Erlin2
Method: single particle / : Qian HW, Jia XX

PDB-9we7:
Cryo-EM structure of RNF170-Erlin1-Erlin2
Method: single particle / : Qian HW, Jia XX

EMDB-72014:
Latent-state loperamide-mu opioid receptor-Gi GDPbS complex (rebound) - Consensus map
Method: single particle / : Gati C, Khan S, Han GW

EMDB-62184:
Cryo-EM structure of human histone deacetylase 6 tandem catalytic domain (HDAC6 CD1-2)
Method: single particle / : Sun C, Xie K, Zhu Z, Chao Y, Zhou Z, Qu Q, Zhu Y

EMDB-73108:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-73109:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

EMDB-73110:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymj:
RQd20_wk56_28 Fab in complex with V703-0537_L14 SOSIP and 3BNC117 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9ymk:
RVz20_wk72_08 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Sewall LM, Ozorowski G, Ward AB

PDB-9yml:
RRr20_wk72_07 Fab in complex with BG505 MD39 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-54410:
Icosahedral reconstruction of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54411:
Chikungunya virus-like particle trimer 1
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54412:
Chikungunya virus-like particle trimer 2
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-54413:
Composite density map of Chikungunya virus-like particle
Method: single particle / : Song X, Kim YC, Huiskonen JT

EMDB-77057:
IST1 bound to PI(3,5)P2 containing membrane
Method: helical / : Moss III FR, Talledge N, Alian A, McCullough J, Frost A, Sundquist WI

EMDB-77058:
IST1 bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Moss III FR, Talledge N, McCullough J, Frost A, Sundquist WI

EMDB-77060:
CHMP1A bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Talledge N, Moss III FR, McCullough J, Frost A, Sundquist WI

PDB-13gh:
IST1 bound to PI(3,5)P2 containing membrane
Method: helical / : Moss III FR, Talledge N, Alian A, McCullough J, Frost A, Sundquist WI

PDB-13gj:
IST1 bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Moss III FR, Talledge N, McCullough J, Frost A, Sundquist WI

PDB-13gm:
CHMP1A bound to PI(4,5)P2 containing membrane
Method: helical / : Alian A, Talledge N, Moss III FR, McCullough J, Frost A, Sundquist WI

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more