[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,992 items for (author: lai & m)

EMDB-57823:
In situ cryo-electron tomogram of phagophore expansion in Atg2-PM4 mutant S. cerevisiae #1
Method: electron tomography / : Ortmann de Percin Northumberland C, Licheva M, Dabrowski R, Gomez-Sanchez R, Berkamp S, Schonnenbeck P, Greaf M, Kraft C, Sachse C

EMDB-57824:
In situ cryo-electron tomogram of macroautophagy phagophore expansion in S. cerevisiae #1
Method: electron tomography / : Ortmann de Percin Northumberland C, Licheva M, Dabrowski R, Gomez-Sanchez R, Berkamp S, Schonnenbeck P, Graef M, Kraft C, Sachse C

EMDB-57825:
In situ cryo-electron tomogram of macroautophagy phagophore expansion in S. cerevisiae #2
Method: electron tomography / : Ortmann de Percin Northumberland C, Licheva M, Dabrowski R, Gomez-Sanchez R, Berkamp S, Schonnenbeck P, Graef M, Kraft C, Sachse C

EMDB-57826:
In situ cryo-electron tomogram of phagophore expansion in Atg2-PM4 mutant S. cerevisiae #3
Method: electron tomography / : Ortmann de Percin Northumberland C, Licheva M, Dabrowski R, Gomez-Sanchez R, Berkamp S, Schonnenbeck P, Graef M, Kraft C, Sachse C

EMDB-57827:
In situ cryo-electron tomogram of phagophore expansion in Atg2-PM4 mutant S. cerevisiae #2
Method: electron tomography / : Ortmann de Percin Northumberland C, Licheva M, Dabrowski R, Gomez-Sanchez R, Berkamp S, Schonnenbeck P, Graef M, Kraft C, Sachse C

EMDB-57771:
Ternary complex of translating ribosome, NAC and NatB
Method: single particle / : Knejski P, Scaiola A, Leibundgut M, Ban N

PDB-30hi:
Ternary complex of translating ribosome, NAC and NatB
Method: single particle / : Knejski P, Scaiola A, Leibundgut M, Ban N

EMDB-73662:
Structure of Mosaic -5 IDD NPs
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73675:
Structure of SS-L2-I53-50NP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73668:
Structure of SS-L2-FerritinNP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-73671:
Structure of SS-L2-LuSNP
Method: single particle / : Dzuvor CK, Corbett-Helaire KS

EMDB-49677:
Pseudomonas aeruginosa CdrA N*-terminal domain
Method: single particle / : Fazio NT, Reichhardt C, di Trani JM, Moss E, Barrington M, Davidson C, Jaysingh AM

EMDB-49679:
Pseudomonas aeruginosa CdrA N*-terminal domain plus ~6 repeats of the extension domain
Method: single particle / : Fazio NT, Reichhardt C, di Trani JM, Moss E, Barrington M, Davidson C, Jaysingh AM

EMDB-56097:
gp13 protein from vB_PagS_MED16 bacteriophage
Method: helical / : Sasnauskas G, Tamulaitiene G, Miksys A, Poviloniene S, Casaite V, Meskys R

EMDB-56098:
gp39 protein from Escherichia phage vB_EcoS_NBD2
Method: single particle / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

EMDB-56099:
gp39 protein from Escherichia phage vB_EcoS_NBD2, unbent tubule, helix refine consensus map
Method: helical / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

EMDB-56100:
gp39 protein from Escherichia phage vB_EcoS_NBD2, unbent tubule, focused map 1
Method: single particle / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

EMDB-56101:
gp39 protein from Escherichia phage vB_EcoS_NBD2, unbent tubule, focused map 2
Method: single particle / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

EMDB-56103:
gp39 protein from Escherichia phage vB_EcoS_NBD2, unbent tubule
Method: single particle / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

PDB-9to0:
gp13 protein from vB_PagS_MED16 bacteriophage
Method: helical / : Sasnauskas G, Tamulaitiene G, Miksys A, Poviloniene S, Casaite V, Meskys R

PDB-9toi:
gp39 protein from Escherichia phage vB_EcoS_NBD2
Method: single particle / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

PDB-9toz:
gp39 protein from Escherichia phage vB_EcoS_NBD2, unbent tubule
Method: single particle / : Sasnauskas G, Tamulaitiene G, Poviloniene S, Casaite V, Meskys R

EMDB-59152:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

PDB-32to:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

EMDB-66732:
Cryo-EM structure of Ceg14 and AnkJ
Method: single particle / : Li Y, Zheng Q, Li S, Wu Y

EMDB-66735:
Cryo-EM structure of Ceg14-AnkJ-Actin complex
Method: single particle / : Li Y, Li S, Zheng Q, Wu Y

EMDB-66822:
Cryo-EM structure of Ceg14 and Actin complex
Method: single particle / : Li Y, Zheng Q, Li S, Wu Y

PDB-9xch:
Cryo-EM structure of Ceg14 and AnkJ
Method: single particle / : Li Y, Zheng Q, Li S

PDB-9xcm:
Cryo-EM structure of Ceg14-AnkJ-Actin complex
Method: single particle / : Li Y, Li S, Zheng Q

PDB-9xfh:
Cryo-EM structure of Ceg14 and Actin complex
Method: single particle / : Li Y, Zheng Q, Li S

EMDB-54981:
GABA-A a4b3d receptor in complex with GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

EMDB-54987:
GABA-A a4b3d receptor in complex with DS2-Me, GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

EMDB-55007:
GABA-A a4b3d receptor in complex with GABA and Nb24
Method: single particle / : Nestorow S, Miller PS

PDB-9sl1:
GABA-A a4b3d receptor in complex with GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

PDB-9sld:
GABA-A a4b3d receptor in complex with DS2-Me, GABA, Nb24 and Mb30
Method: single particle / : Nestorow S, Miller PS

PDB-9slm:
GABA-A a4b3d receptor in complex with GABA and Nb24
Method: single particle / : Nestorow S, Miller PS

EMDB-66671:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

PDB-9x9t:
Local refinement of SARS-CoV-2 KP.3.1.1 RBD with BD57-2704 and AB2-122 Fab
Method: single particle / : Cao YL, Wang YX

EMDB-59342:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-6
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-59343:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-4
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-59344:
Cryo-EM structure of MAGE-A4 (230-239)-bound HLA-A*02:01 in complex with Fab VR-58
Method: single particle / : Schuster S, Weng TH, Reinhart C, Michel H, Birkenfeld J

EMDB-56124:
Asp2Cas12l-sgRNA bound to target DNA
Method: single particle / : Sasnauskas G, Tamulaitiene G, Urbaitis T, Gasiunas G

PDB-9tq4:
Asp2Cas12l-sgRNA bound to target DNA
Method: single particle / : Sasnauskas G, Tamulaitiene G, Urbaitis T, Gasiunas G

EMDB-55134:
P. abyssi hibernation factor Hib bound to ATP (Hib-PTC conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55140:
Cryo-EM structure of the N-terminal domain of Hib bound to the L1 stalk of Pyrococcus abyssi 70S
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sr9:
P. abyssi hibernation factor Hib bound to ATP (Hib-PTC conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srf:
Cryo-EM structure of the N-terminal domain of Hib bound to the L1 stalk of Pyrococcus abyssi 70S
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-54535:
Cryo-EM map of the E. coli 50S ribosomal subunit
Method: single particle / : Bron P, Lai-Kee-Him J

EMDB-54534:
Cryo-EM map of the E. coli 50S ribosomal subunit in complex with the vibriophage peptide deformylase (Vp16-PDF)
Method: single particle / : Bron P, Lai-Kee-Him J

EMDB-54531:
Universal Photosystem II Intermediate with Light-Dependent Water-Ferrocyanide Oxydo-reductase activity from Pisum sativum
Method: single particle / : Nelson N, Klaiman D, Fadeeva M, Kandiah E

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more