[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,939 items for (author: lai & m)

EMDB-56124:
Asp2Cas12l-sgRNA bound to target DNA
Method: single particle / : Sasnauskas G, Tamulaitiene G, Urbaitis T, Gasiunas G

PDB-9tq4:
Asp2Cas12l-sgRNA bound to target DNA
Method: single particle / : Sasnauskas G, Tamulaitiene G, Urbaitis T, Gasiunas G

EMDB-55134:
P. abyssi hibernation factor Hib bound to ATP (Hib-PTC conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55140:
Cryo-EM structure of the N-terminal domain of Hib bound to the L1 stalk of Pyrococcus abyssi 70S
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sr9:
P. abyssi hibernation factor Hib bound to ATP (Hib-PTC conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srf:
Cryo-EM structure of the N-terminal domain of Hib bound to the L1 stalk of Pyrococcus abyssi 70S
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-54535:
Cryo-EM map of the E. coli 50S ribosomal subunit
Method: single particle / : Bron P, Lai-Kee-Him J

EMDB-54534:
Cryo-EM map of the E. coli 50S ribosomal subunit in complex with the vibriophage peptide deformylase (Vp16-PDF)
Method: single particle / : Bron P, Lai-Kee-Him J

EMDB-54531:
Universal Photosystem II Intermediate with Light-Dependent Water-Ferrocyanide Oxydo-reductase activity from Pisum sativum
Method: single particle / : Nelson N, Klaiman D, Fadeeva M, Kandiah E

PDB-9s3e:
Universal Photosystem II Intermediate with Light-Dependent Water-Ferrocyanide Oxydo-reductase activity from Pisum sativum
Method: single particle / : Nelson N, Klaiman D, Fadeeva M

EMDB-54533:
Cryo-EM map of the E. coli 70S ribosome
Method: single particle / : Bron P, Lai-Kee-Him J

EMDB-65636:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-65637:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4k:
Cryo-EM structure of inhibitor E822-1968 bound human urea transporter A2.
Method: single particle / : Huang S, Sun J

PDB-9w4l:
Cryo-EM structure of inhibitor M353-0039 bound urea transporter A2.
Method: single particle / : Huang S, Sun J

EMDB-73392:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

EMDB-73457:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

PDB-9ysg:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody AB2-122 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Jonaid G, Batra H, Kibria G, Chen B, Alt FW

PDB-9ytc:
Cryo-EM structure of SARS-CoV-2 Omicron neutralizing antibody S212 with BA.5 RBD and SP1-77 Fab complex
Method: single particle / : Batra H, Zhang J, Jonaid G, Kibria G, Chen B, Alt FW

EMDB-53558:
pro-TGF-beta1 in complex with the third TB Domain from Latent Transforming Growth Factor-beta Binding Protein-1
Method: single particle / : Biggin G, Snee M, Godwin A, Roseman A, Baldock C

PDB-9r3s:
pro-TGF-beta1 in complex with the third TB Domain from Latent Transforming Growth Factor-beta Binding Protein-1
Method: single particle / : Biggin G, Snee M, Godwin A, Roseman A, Baldock C

EMDB-55135:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55136:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55137:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55139:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-55636:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sra:
Cryo-EM structure of P. abyssi HibA:ribosome with an SD:antiSD duplex
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9srb:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA and SBDS
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9src:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA in PTC conformation
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9sre:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (PTC conformation with E-site tRNA)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

PDB-9t7h:
Cryo-EM structure of P. abyssi 70S ribosome in complex with hibernation factor HibA (L1 stalk conformation)
Method: single particle / : Madru CM, Bourgeois GB, Mechulam YM, Schmitt ES

EMDB-69566:
The structure of oocytes cytoplasmic lattices
Method: single particle / : Liu Q, Gui M

EMDB-69573:
The high-order structure of CPL filament-consensus map
Method: single particle / : Liu Q, Gui M

EMDB-69578:
The high-order structure of CPL filament-side1 map
Method: single particle / : Liu Q, Gui M

EMDB-69579:
The high-order structure of CPL filament-side2 map
Method: single particle / : Liu Q, Gui M

EMDB-69581:
The high-order structure of CPL filament-dimer2 map
Method: single particle / : Liu Q, Gui M

EMDB-69582:
The high-order structure of CPL filament-dimer1 map
Method: single particle / : Liu Q, Gui M

EMDB-69583:
The high-order structure of CPL filament-stitched map
Method: single particle / : Liu Q, Gui M

EMDB-52462:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 (dinucleotide-binding pocket mutant Q494Y)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52464:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 (oligomerization mutant R551E)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52468:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 saturated with pdApdG dinucleotide (HEPN active site mutant R502A)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52474:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 saturated with pdGpdG dinucleotide (HEPN active site mutant R502A)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52475:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 saturated with pdCpdG dinucleotide (HEPN active site mutant R502A)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52477:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 co-purified with pdCpdG dinucleotide (HEPN active site mutant R502A)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52478:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 saturated with pdCpdG dinucleotide
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52479:
Bacterial antiviral defense protein Ec3ApeA from Escherichia coli strain KK-NP016
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52481:
Putative bacterial antiviral defense protein Thr1ApeA from Thermoactinospora rubra strain YIM 77501
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52482:
Putative bacterial antiviral defense protein Ec4ApeA from Escherichia coli strain 10434wH10
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

EMDB-52483:
Bacterial antiviral defense protein Ec1ApeA from Escherichia coli strain NCTC8008
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

PDB-9hxb:
Bacterial antiviral defense protein Ec2ApeA from Escherichia coli strain 2-156-04_S4_C1 (dinucleotide-binding pocket mutant Q494Y)
Method: single particle / : Sasnauskas G, Juozapaitis J, Puteikiene R, Tamulaitiene G

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more