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Showing 1 - 50 of 56 items for (author: kassa & a)

EMDB-49511: 
CH35 V1V2V3 and gp41-base macaque polyclonal Fabs in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49512: 
CH35 gp41-FP macaque polyclonal Fab in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49513: 
CH70 gp41-GH macaque polyclonal Fab in complex with Q23-APEX-GT2 trimer
Method: single particle / : Lee WH, Ozorowski G, Ward AB

EMDB-49865: 
Cryo-EM structure of V2 apex germline-targeting HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49866: 
Cryo-EM structure of rhesus antibody CH35-Apex1.08 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49867: 
Cryo-EM structure of rhesus antibody CI91-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49868: 
Cryo-EM structure of rhesus antibody CH70-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49869: 
Cryo-EM structure of rhesus antibody CH70-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49870: 
Cryo-EM structure of rhesus antibody CH42-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-49871: 
Cryo-EM structure of rhesus antibody CH42-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvv: 
Cryo-EM structure of V2 apex germline-targeting HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvw: 
Cryo-EM structure of rhesus antibody CH35-Apex1.08 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvx: 
Cryo-EM structure of rhesus antibody CI91-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvy: 
Cryo-EM structure of rhesus antibody CH70-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nvz: 
Cryo-EM structure of rhesus antibody CH70-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nw0: 
Cryo-EM structure of rhesus antibody CH42-Apex1.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

PDB-9nw1: 
Cryo-EM structure of rhesus antibody CH42-Apex2.01 in complex with HIV Env trimer Q23-APEX-GT2
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-74113: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-74114: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

PDB-9zen: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1B2
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

PDB-9zeo: 
Competition for different elements of the nucleosome acidic patch yields distinct functional outcomes. VHH 1G1
Method: single particle / : Chakraborty U, Saccone EC, Becerra GC, Khan LF, Arslanovic N, Aguilar R, Gloor SL, Hunt SR, Folkwein HJ, Husby NL, Maier KE, Marunde MR, Schomburg NK, Vaidya A, Cowles MW, Venters BJ, Kassavetis G, Sun ZW, Kadonaga JT, Armache JP, Keogh MC, Tyler JK

EMDB-46536: 
Two Dsup molecules in complex with the nucleosome open from both sides
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46537: 
Two Dsup molecules in complex with the nucleosome open from the left side
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46538: 
Two HMGN2s in complex with the nucleosome
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46539: 
Two HMGN5s in complex with the nucleosome
Method: single particle / : Alegrio-Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46540: 
167-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46541: 
167-bp 5S rDNA nucleosome cross-linked with formaldehyde (stretched due to preferential views but relevant for assessing DNA flexibility)
Method: single particle / : Alegrio-Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46542: 
167-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46543: 
167-bp 5S rDNA nucleosome - open I (open only on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46544: 
167-bp 5S rDNA nucleosome - open II
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46545: 
147-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46546: 
147-bp 5S rDNA nucleosome - open I (open on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-46547: 
147-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3k: 
Two Dsup molecules in complex with the nucleosome open from both sides
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3l: 
Two Dsup molecules in complex with the nucleosome open from the left side
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3m: 
Two HMGN2s in complex with the nucleosome
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3n: 
167-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3o: 
167-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3p: 
167-bp 5S rDNA nucleosome - open I (open only on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3q: 
167-bp 5S rDNA nucleosome - open II
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3r: 
147-bp 5S rDNA nucleosome - closed
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3s: 
147-bp 5S rDNA nucleosome - open I (open on the downstream side)
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

PDB-9d3t: 
147-bp 5S rDNA nucleosome cross-linked with glutaraldehyde
Method: single particle / : Alegrio Louro J, Cruz-Becerra G, Kadonaga JT, Leschziner AE

EMDB-43499: 
Engineered peptide-specific binder in complex with HLA-DR1/CLIP
Method: single particle / : Jude KM, Yang X, Du H, Kassardjian A, Julien JP, Huang P, Garcia KC

PDB-8vsj: 
Engineered peptide-specific binder in complex with HLA-DR1/CLIP
Method: single particle / : Jude KM, Yang X, Du H, Kassardjian A, Julien JP, Huang P, Garcia KC

EMDB-15882: 
Mp2Ba1 pre-pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

EMDB-15883: 
Mpf2Ba1 pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

PDB-8b6v: 
Mp2Ba1 pre-pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

PDB-8b6w: 
Mpf2Ba1 pore
Method: single particle / : Marini G, Poland B, Leininger C, Lukoyanova N, Spielbauer D, Barry J, Altier D, Lum A, Scolaro E, Perez Ortega C, Yalpani N, Sandahl G, Mabry T, Klever J, Nowatzki T, Zhao JZ, Sethi A, Kassa A, Crane V, Lu A, Nelson ME, Eswar N, Topf M, Saibil HR

EMDB-2282: 
TFIIA-induced conformational changes of human TFIID suggest a modular architecture that is required for core promoter specific interactions
Method: single particle / : Cianfrocco MA, Grob P, Fang J, Kassavetis GA, Juven-Gershon T, Kadonaga JT, Nogales E
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