[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 55 items for (author: jensen & aa)

EMDB-51524:
Maps from particle subsets of methylamine treated human complement C3 showing three distinct ANA positions
Method: single particle / : Joergensen MH, Andersen GR

EMDB-43148:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43149:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43150:
Human monoclonal antibody C7 targeting HB3VAR03 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

EMDB-44539:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdf:
Cryo-EM structure of human monoclonal antibody C7 targeting IT4VAR22 CIDRa1.7 (PfEMP1 A)
Method: single particle / : Raghavan SSR, Ward AB

PDB-8vdg:
Cryo-EM structure of human monoclonal antibody C74 targeting IT4VAR22 CIDRa1.7
Method: single particle / : Raghavan SSR, Ward AB

PDB-9bhb:
Cryo-EM structure of human monoclonal antibody C74 targeting PFD1235w (CIDRa1.6) PfEMP1
Method: single particle / : Raghavan SSR, Ward AB

EMDB-43475:
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus methaqualone
Method: single particle / : Chojnacka W, Teng J, Kim JJ, Jensen AA, Hibbs RE

EMDB-43485:
Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus PPTQ
Method: single particle / : Chojnacka W, Teng J, Kim JJ, Jensen AA, Hibbs RE

EMDB-17325:
Focused Cryo-EM map on TE-CUB of C3*
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17326:
Focused Cryo-EM map on MG-ring of C3*
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17327:
Combined map of C3* (composite structure)
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17328:
Homogeneously refined Cryo-EM map centred on MG7 of C3*
Method: single particle / : Joergensen MH, Andersen GR

EMDB-17103:
Structure of methylamine treated human complement C3
Method: single particle / : Gadeberg TAF, Andersen GR

PDB-8oq3:
Structure of methylamine treated human complement C3
Method: single particle / : Gadeberg TAF, Andersen GR

EMDB-14777:
Cryo-EM structure of archaic chaperone-usher Csu pilus of Acinetobacter baumannii
Method: helical / : Pakharukova N, Malmi H, Tuittila M, Paavilainen S, Ghosal D, Chang YW, Jensen GJ, Zavialov AV

PDB-7zl4:
Cryo-EM structure of archaic chaperone-usher Csu pilus of Acinetobacter baumannii
Method: helical / : Pakharukova N, Malmi H, Tuittila M, Paavilainen S, Ghosal D, Chang YW, Jensen GJ, Zavialov AV

EMDB-13847:
Cryo-EM structure of native human A2ML1
Method: single particle / : Zarantonello A, Nielsen NS

EMDB-13848:
Structure of TEV cleaved A2ML1 (A2ML1-TE)
Method: single particle / : Nielsen NS, Zarantonello A

EMDB-13849:
Structure of TEV conjugated A2ML1 (A2ML1-TC)
Method: single particle / : Nielsen NS, Zarantonello A

EMDB-13850:
Structure of TEV cleaved A2ML1 dimer (A2ML1-TT dimer)
Method: single particle / : Nielsen NS, Zarantonello A

PDB-7q5z:
Cryo-EM structure of native human A2ML1
Method: single particle / : Zarantonello A, Nielsen NS, Andersen GR

PDB-7q60:
Structure of TEV cleaved A2ML1 (A2ML1-TE)
Method: single particle / : Nielsen NS, Zarantonello A, Andersen GR

PDB-7q61:
Structure of TEV conjugated A2ML1 (A2ML1-TC)
Method: single particle / : Nielsen NS, Zarantonello A, Andersen GR

PDB-7q62:
Structure of TEV cleaved A2ML1 dimer (A2ML1-TT dimer)
Method: single particle / : Nielsen NS, Zarantonello A, Andersen GR

EMDB-0225:
Mouse serotonin 5-HT3 receptor, serotonin-bound, F conformation
Method: single particle / : Polovinkin L, Neumann E

EMDB-0226:
Mouse serotonin 5-HT3 receptor, serotonin-bound, I1 conformation
Method: single particle / : Polovinkin L, Neumann E

EMDB-0227:
Mouse serotonin 5-HT3 receptor, serotonin-bound, I2 conformation
Method: single particle / : Polovinkin L, Neumann E

EMDB-0228:
Mouse serotonin 5-HT3 receptor, tropisetron-bound, T conformation
Method: single particle / : Polovinkin L, Neumann E

EMDB-7793:
Thermostablilized dephosphorylated chicken CFTR
Method: single particle / : Fay JF, Riordan JR

EMDB-7794:
Thermostabilized phosphorylated chicken CFTR
Method: single particle / : Fay JF, Riordan JR

EMDB-8407:
Cryo-EM structure of a BG505 Env-sCD4-17b-8ANC195 complex
Method: single particle / : Wang H, Bjorkman PJ

EMDB-3398:
Electron Cryotomography and subvolume averaging of the cytoplasmic chemoreceptor array in Vibrio cholerae
Method: subtomogram averaging / : Briegel A, Ortega D R, Mann P, Kjaer A, Ringgaard S, Jensen G J

EMDB-3247:
Subtomogram average of a piliated type IVa pilus machine in wild-type Myxococcus xanthus cells
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3248:
Subtomogram average of a non-piliated type IVa pilus machine in wild-type Myxococcus xanthus cells
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3249:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilP knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3250:
Subtomogram average of a piliated type IVa pilus machine in Myxococcus xanthus cells with PilP tagged with a superfolder GFP
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3251:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with PilP tagged with a superfolder GFP
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3252:
Subtomogram average of a piliated type IVa pilus machine in Myxococcus xanthus cells with tsaP knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3253:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with tsaP knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3254:
Subtomogram average of a piliated type IVa pilus machine in Myxococcus xanthus cells with PilO tagged with a superfolder GFP
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3255:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with PilO tagged with a superfolder GFP
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3256:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilC knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3257:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilA knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3258:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilV/pilW/fimU knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3259:
Subtomogram average of a piliated type IVa pilus machine in Myxococcus xanthus cells with pilT knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3260:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilB knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3261:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilB/pilT knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

EMDB-3262:
Subtomogram average of a non-piliated type IVa pilus machine in Myxococcus xanthus cells with pilM knockout
Method: subtomogram averaging / : Chang YW, Rettberg LA, Treuner-Lange A, Iwasa J, Sogaard-Andersen L, Jensen GJ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more