[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 102 items for (author: jenkins & d)

EMDB-18990:
CryoEM map of tau PHF sarkosyl-extracted from a human AD patient (associated with in situ tomography)

EMDB-50148:
Tau PHF subtomogram average relating to CS1 extended data Figure 9A

EMDB-50152:
Tau PHF subtomogram average relating to CS2 Figure 3i-j.

EMDB-50153:
Tau PHF subtomogram average relating to CS3 extended data Figure 9c

EMDB-50155:
Tau PHF subtomogram average relating to CS4 extended data Figure 9d

EMDB-50156:
Tau PHF subtomogram average relating to CS5 extended data Figure 9b

EMDB-50157:
Tau PHF subtomogram average relating to CS6 extended data Figure 9e

EMDB-50159:
Tau PHF subtomogram average relating to CS7 extended data Figure 9f

EMDB-50160:
Tau PHF subtomogram average relating to LOL1_PHF Figure 4g-h

EMDB-50161:
Tau SF subtomogram average relating to LOL1_SF Figure 4g-h

EMDB-50162:
Tau SF subtomogram average relating to LOL2_SF Figure 4i-j

EMDB-50358:
In vitro-induced genome-releasing intermediate of Rhodobacter microvirus Ebor computed with C5 symmetry

EMDB-50356:
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry

EMDB-50357:
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry

EMDB-50359:
Rhodobacter microvirus Ebor attached to B10 host cell reconstructed by single particle analysis with applied C5 symmetry

EMDB-50360:
Rhodobacter microvirus Ebor attached to the outer membrane vesicle

EMDB-50361:
Rhodobacter microvirus Ebor attached to the host cell reconstructed by subtomogram averaging

PDB-9ffg:
Empty capsid of Rhodobacter microvirus Ebor computed with I4 symmetry

PDB-9ffh:
Native capsid of Rhodobacter microvirus Ebor computed with I4 symmetry

EMDB-40954:
ADP-bound Bcs1 (C7 symmetrized)

EMDB-41061:
ATP-1 state of Bcs1 (C7 symmetrized)

EMDB-41095:
ADP-bound Bcs1 (unsymmetrized)

EMDB-41148:
Apo Bcs1, unsymmetrized

EMDB-41276:
ATP-1 state of Bcs1 (unsymmetrized)

EMDB-41462:
ATP-2 state of Bcs1 (C7 symmetrized)

EMDB-41476:
ATP-2 state of Bcs1 (unsymmetrized)

EMDB-41609:
Bcs1 bound with ISP-ED

PDB-8t14:
ADP-bound Bcs1 (C7 symmetrized)

PDB-8t5u:
ATP-1 state of Bcs1 (C7 symmetrized)

PDB-8t7u:
ADP-bound Bcs1 (unsymmetrized)

PDB-8tby:
Apo Bcs1, unsymmetrized

PDB-8ti0:
ATP-1 state of Bcs1 (unsymmetrized)

PDB-8tp1:
ATP-2 state of Bcs1 (C7 symmetrized)

PDB-8tpl:
ATP-2 state of Bcs1 (unsymmetrized)

EMDB-19132:
Structure of dynein-2 intermediate chain DYNC2I2 (WDR34) in complex with dynein-2 heavy chain DYNC2H1.

EMDB-19133:
Structure of dynein-2 intermediate chain DYNC2I1 (WDR60) in complex with the dynein-2 heavy chain DYNC2H1.

PDB-8rgg:
Structure of dynein-2 intermediate chain DYNC2I2 (WDR34) in complex with dynein-2 heavy chain DYNC2H1.

PDB-8rgh:
Structure of dynein-2 intermediate chain DYNC2I1 (WDR60) in complex with the dynein-2 heavy chain DYNC2H1.

EMDB-41008:
Cryo-EM structure of the DHA bound FFA4-Gq complex

EMDB-41010:
Cryo-EM structure of the Butyrate bound FFA2-Gq complex

EMDB-41013:
Cryo-EM structure of the DHA bound FFA1-Gq complex

PDB-8t3q:
Cryo-EM structure of the DHA bound FFA4-Gq complex

PDB-8t3s:
Cryo-EM structure of the Butyrate bound FFA2-Gq complex

PDB-8t3v:
Cryo-EM structure of the DHA bound FFA1-Gq complex

EMDB-43013:
Myxococcus xanthus HEnc-K417N(A) protein shell with icosahedral T=1 symmetry

EMDB-43016:
Myxococcus xanthus HEnc-K417N(A) protein shell with tetrahedral symmetry (12 pentamers, 4 hexamers)

EMDB-43037:
Myxococcus xanthus HEnc-K417N(A) protein shell with D3 symmetry (12 pentamers, 3 hexamers)

EMDB-43038:
Myxococcus xanthus HEnc-K417N(A) protein shell with D6 symmetry (12 pentamers, 8 hexamers)

EMDB-43039:
Myxococcus xanthus HEnc-K417N(A) protein shell with C2 symmetry (12 pentamers, 9 hexamers)

EMDB-43040:
Myxococcus xanthus HEnc-K417N(A) protein shell with D3 symmetry (12 pentamers, 11 hexamers)

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbjlvh1.pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more