[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 12,705 items for (author: hua & j)

EMDB-76291:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

PDB-12bp:
Cryo-EM structure of human DDB1-CRBN-GSPT1 in complex with GT19630
Method: single particle / : Huang J, Chu HF, Tong L

EMDB-68398:
Cryo-EM structure of the BTNL3-BTNL8-TCR complex
Method: single particle / : Dong D, Zhu Y, Huang Z

PDB-22kk:
Cryo-EM structure of the BTNL3-BTNL8-TCR complex
Method: single particle / : Dong D, Zhu Y, Huang Z

EMDB-66140:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

PDB-9wpe:
Cryo-EM structure of the insect sex pheromone receptor ApisOR22-Orco heterocomplex bound with nepetalactone in the closed state.
Method: single particle / : Dong Z, Wang YD, Guan ZY, Wang GR, Yin P

EMDB-65931:
Cryo-EM consensus map of PSI-LHCI-LHCII supercomplex from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-65939:
Cryo-EM focused refinement map of LHC-(6-9) from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-65940:
Cryo-EM focused refinement map of LHC-10 of the PSI-LHCI-LHCII supercomplex from Euglena gracilis
Method: single particle / : Huang GQ, Dong SS, Sui SF, Qin XC

EMDB-71893:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-73816:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9pvm:
cryoEM structure of drug bound human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

PDB-9z5i:
cryoEM structure of human SLC33A1 transporter
Method: single particle / : Rafiq M, Lander GC

EMDB-73688:
Cryo-EM structure of VVD-908 NLRP3 complex
Method: single particle / : Bernard SM

PDB-9z03:
Cryo-EM structure of VVD-908 NLRP3 complex
Method: single particle / : Bernard SM

EMDB-56124:
Asp2Cas12l-sgRNA bound to target DNA
Method: single particle / : Sasnauskas G, Tamulaitiene G, Urbaitis T, Gasiunas G

PDB-9tq4:
Asp2Cas12l-sgRNA bound to target DNA
Method: single particle / : Sasnauskas G, Tamulaitiene G, Urbaitis T, Gasiunas G

EMDB-48426:
Cryo-EM local map of six VRC35 Fabs bound to influenza H3N2 Victoria 2011 hemagglutinin head
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Kanekiyo M, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-49628:
Composite map of three pairs of dimeric VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

PDB-9npm:
Composite map of three pairs of dimeric VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-48427:
Cryo-EM local map of dimeric VRC35 Fabs bound to N-linked glycans N126, N165, and N246 on influenza H3N2 Victoria 2011 hemagglutinin head
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Kanekiyo M, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-74755:
CryoEM structure of H5N1 A/Texas/37/2024 HA bound to Fab H91
Method: single particle / : Morano NC, Ho DD, Shapiro L, Kwong PD

EMDB-66494:
high affinity IgG1 Fc variant in complex with Fc gamma receptor IIIA 158F
Method: single particle / : Longlong L, Yangyihua Z, Jiannan F, Xiang G, Yaowei M

PDB-9x35:
high affinity IgG1 Fc variant in complex with Fc gamma receptor IIIA 158F
Method: single particle / : Longlong L, Yangyihua Z, Jiannan F, Xiang G, Yaowei M

EMDB-74801:
Cryo-EM map of VRC35 Fab bound to the SARS-CoV-2 LP.8.1.9 spike protein
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-49633:
Global map of six VRC36 Fabs bound to HIV-1 BG505.T332N DS-SOSIP.664 Env trimer
Method: single particle / : Cheng J, Cale EM, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Zhou T, Kwong PD

EMDB-74843:
Cryo-EM map of VRC35 Fab bound to the Lassa virus glycoprotein complex
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-74798:
Cryo-EM local density map of VRC35 Fab bound to N-linked glycans on the SARS-CoV-2 LP.8.1.9 spike protein
Method: single particle / : Cheng J, Longo N, Sutton MS, Lei H, Huang R, Morton AJ, Lang ZC, Morano NC, Roark RS, Becker JE, Tsybovsky Y, Li N, Zhang B, Du H, Rubin S, Shapiro L, Pierson TC, Doria-Rose NA, Kwong PD, Zhou T

EMDB-68988:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2)
Method: single particle / : Liu Z, Cao S, Zou J

EMDB-68990:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) with phosphate
Method: single particle / : Liu Z, Cao S, Zou J

EMDB-68992:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) at pH5.
Method: single particle / : Liu Z, Cao S, Zou J

PDB-23ic:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2)
Method: single particle / : Liu Z, Cao S, Zou J

PDB-23if:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) with phosphate
Method: single particle / : Liu Z, Cao S, Zou J

PDB-23ig:
Cryo-EM structure of Oryza sativa vacuolar phosphate efflux transporter 2 (OsVPE2) at pH5.
Method: single particle / : Liu Z, Cao S, Zou J

EMDB-68020:
The cryo-EM map of p24 complex at pH 5.0
Method: single particle / : Hua ZK, Zhang D, Zhang M, Yu HJ

EMDB-54564:
Cryo-EM structure of lncRNA CONCR (nucleotides 419-718)
Method: single particle / : Lopez-Perrote A, Llorca O, Boskovic J, Le Coq J

EMDB-65684:
Cryo-EM structure of a stacked human nucleosome core particle dimer assembled with DNA truncated at SHL-4.5
Method: single particle / : Mu Z, Huang J

EMDB-65686:
Cryo-EM structure of a stacked human nucleosome core particle trimer assembled with DNA truncated at SHL-4.5
Method: single particle / : Mu Z, Huang J

EMDB-65690:
Cryo-EM structure of a stacked human nucleosome core particle tetramer assembled with DNA truncated at SHL-4.5
Method: single particle / : Mu Z, Huang J

EMDB-65691:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 3) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65692:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 4) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65693:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 1, top NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65694:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 1&2, bottom NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65695:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 2, top NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65696:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 5, top NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65697:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 5, bottom NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65698:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 6, top NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65699:
Cryo-EM structure of a stacked human nucleosome core particle dimer (type 6, bottom NCP) assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65700:
Cryo-EM structure of a stacked human nucleosome core particle trimer assembled with DNA truncated at SHL-5.5
Method: single particle / : Mu Z, Huang J

EMDB-65701:
Cryo-EM structure of a stacked human nucleosome core particle trimer assembled with DNA truncated at SHL-5.5 and containing an H4 N-tail
Method: single particle / : Mu Z, Huang J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more