[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 470 items for (author: gopal & d)

EMDB-55720:
Cryo-EM reconstruction for n-Tr20U.
Method: single particle / : Mehta R, Glatt S

EMDB-55721:
Cryo-EM structure of nTr20 tRNA
Method: single particle / : Mehta R, Glatt S

EMDB-70129:
KICSTOR-GATOR1 complex (SZT2 [1300-2400]) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70130:
KICSTOR-GATOR1 complex (SZT2 [2000-3200], KPTN, ITFG2) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70131:
KICSTOR-GATOR1 complex (SZT2 [2800-3432], C12orf66) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70132:
KICSTOR-GATOR1 (SZT2 [1-2000], NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70134:
KICSTOR-GATOR1 (DEPDC5, NPRL2, NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70135:
The KICSTOR-GATOR1 complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70137:
KICSTOR-GATOR1 dimer supercomplex (DEPDC5) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70138:
KICSTOR-GATOR1 dimer supercomplex (SZT2, NPRL2, NPRL3) focused refinement
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5a:
The KICSTOR-GATOR1 complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70116:
The KICSTOR-GATOR1 complex (consensus)
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70117:
KICSTOR-GATOR1 complex (SZT2 [1-1330], NPRL2, NPRL3, DEPDC5) focused refinement.
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70136:
KICSTOR-GATOR1 dimer supercomplex (consensus)
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-65338:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in partial R-loop state
Method: single particle / : Ishihara K, Numata T

EMDB-65339:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1
Method: single particle / : Ishihara K, Numata T

EMDB-65340:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 2
Method: single particle / : Ishihara K, Numata T

PDB-9vtp:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in partial R-loop state
Method: single particle / : Ishihara K, Numata T

PDB-9vtq:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 1
Method: single particle / : Ishihara K, Numata T

PDB-9vtr:
Target DNA-bound type I-F3 TniQ-Cascade of Vibrio parahaemolyticus in full R-loop state 2
Method: single particle / : Ishihara K, Numata T

EMDB-48778:
Focused refinement map of the human M4 muscarinic acetylcholine receptor bound to the bitopic agonist C110
Method: single particle / : Kaoullas MG, Mobbs JI, Venugopal H, Thal DM

EMDB-48779:
Human M4 muscarinic acetylcholine receptor Gi1 complex (mini-Gsi chimera) bound to the bitopic agonist C110
Method: single particle / : Kaoullas MG, Mobbs JI, Venugopal H, Thal DM

PDB-9n09:
Human M4 muscarinic acetylcholine receptor Gi1 complex (mini-Gsi chimera) bound to the bitopic agonist C110
Method: single particle / : Kaoullas MG, Mobbs JI, Venugopal H, Thal DM

EMDB-70140:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-70141:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5d:
The KICSTOR-GATOR1-SAMTOR complex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

PDB-9o5e:
The dimeric KICSTOR-GATOR1 supercomplex
Method: single particle / : Bayly-Jones C, Lupton CJ, Chang YG, Ellisdon AM

EMDB-65385:
cryo-EM structure of gastric proton pump bound to YK01
Method: single particle / : Saito H, Abe K

PDB-9vvo:
cryo-EM structure of gastric proton pump bound to YK01
Method: single particle / : Saito H, Abe K

EMDB-72825:
Human delta opioid receptor complex with mini-Gi and agonist DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72826:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72827:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72828:
receptor focused refinement of human delta opioid receptor complex with mini-Gi and DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72829:
receptor focused refinement of the human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72830:
receptor focused refinement of human delta opioid receptor complex with mini-Gi, agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72831:
conensus map of the human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator BMS-986187
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-72832:
receptor focused refinement of human delta opioid complex with mini-Gi, agonist DADLE and allosteric modulator BMS-986187
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

PDB-9ydp:
Human delta opioid receptor complex with mini-Gi and agonist DADLE
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

PDB-9ydq:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3614
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

PDB-9ydr:
Human delta opioid receptor complex with mini-Gi and agonist DADLE and allosteric modulator MIPS3983
Method: single particle / : Mobbs JI, Venugopal H, Thal DM

EMDB-70660:
Human PORCN bound to inhibitor C59
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70661:
Human PORCN bound to inhibitor ETC159
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-70662:
Apo Human PORCN
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo6:
Human PORCN bound to inhibitor C59
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo7:
Human PORCN bound to inhibitor ETC159
Method: single particle / : Black KA, Venugopal H, Glukhova A

PDB-9oo8:
Apo Human PORCN
Method: single particle / : Black KA, Venugopal H, Glukhova A

EMDB-65136:
Cryo-EM structure of a human flippase mutant ATP11C Q79E-CDC50A in PtdCho-occluded E2-AlF state
Method: single particle / : Qian Y, Abe K

EMDB-65217:
Cryo-EM structure of a human flippase mutant ATP11C Q79E-CDC50A in PtdSer-occluded E2P-AlF state
Method: single particle / : Qian Y, Abe K

EMDB-65258:
Cryo-EM structure of a human flippase mutant ATP11C Q79A-CDC50A in the PtdSer-occluded E2-AlF state
Method: single particle / : Qian Y, Abe K

EMDB-65302:
Cryo-EM structrure of a human flippase mutant ATP11C Q79E-CDC50A in PtdCho-open E2-BeF state
Method: single particle / : Qian Y, Abe K

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more