[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 97 items for (author: firlar & e)

EMDB-43617:
Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the Apo State Determined on Talos Arctica microscope
Method: single particle / : Ashraf KU, Punetha A, Petrou VI

EMDB-43812:
Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the UDP-bound State Determined on Talos Arctica microscope
Method: single particle / : Ashraf KU, Punetha A, Petrou VI

EMDB-44302:
Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the Apo State Determined on Krios microscope
Method: single particle / : Ashraf KU, Punetha A, Petrou VI

PDB-8vxh:
Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the Apo State Determined on Talos Arctica microscope
Method: single particle / : Ashraf KU, Punetha A, Petrou VI

PDB-9asc:
Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the UDP-bound State Determined on Talos Arctica microscope
Method: single particle / : Ashraf KU, Punetha A, Petrou VI

PDB-9b77:
Cryo-EM Structure of the Glycosyltransferase ArnC from Salmonella enterica in the Apo State Determined on Krios microscope
Method: single particle / : Ashraf KU, Punetha A, Petrou VI

EMDB-44438:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 44 nt RNA
Method: single particle / : You L, Ebright RH

EMDB-44439:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 52 nt RNA
Method: single particle / : You L, Ebright RH

EMDB-44454:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 44 nt RNA
Method: single particle / : You L, Ebright RH

EMDB-44455:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 52 nt RNA
Method: single particle / : You L, Ebright RH

EMDB-44649:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 44 nt RNA (local refinement map)
Method: single particle / : You L, Ebright RH

EMDB-44650:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 52 nt RNA (local refinement map)
Method: single particle / : You L, Ebright RH

PDB-9bct:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 44 nt RNA
Method: single particle / : You L, Ebright RH

PDB-9bcu:
Cryo-EM structure of Thermococcus kodakarensis FttA-dependent transcription pre-termination complex containing 52 nt RNA
Method: single particle / : You L, Ebright RH

EMDB-27864:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27865:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

EMDB-27897:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27913:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27914:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

EMDB-27915:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27916:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27917:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

EMDB-27918:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27928:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27929:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27930:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

EMDB-27931:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27932:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-27933:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8e3f:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e3h:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5k:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5l:
Escherichia coli Rho-dependent transcription pre-termination complex containing 21 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5o:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e5p:
Escherichia coli Rho-dependent transcription pre-termination complex containing 24 nt long RNA spacer, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C

PDB-8e6w:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; Rho part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8e6x:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, lambda-tR1 rut RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C

PDB-8e6z:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; TEC part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

PDB-8e70:
Escherichia coli Rho-dependent transcription pre-termination complex containing 18 nt long RNA spacer, dC75 rut mimic RNA, Mg-ADP-BeF3, and NusG; Rho hexamer part
Method: single particle / : Molodtsov V, Wang C, Ebright RH

EMDB-24424:
Cryo-EM structure of Thermus thermophilus reiterative transcription complex with 11nt oligo-G RNA
Method: single particle / : Liu Y, Ebright RH

PDB-7rdq:
Cryo-EM structure of Thermus thermophilus reiterative transcription complex with 11nt oligo-G RNA
Method: single particle / : Liu Y, Ebright RH

EMDB-21959:
Colicin E1 fragment in nanodisc-embedded TolC
Method: single particle / : Kaelber JT, Budiardjo SJ

EMDB-21960:
Colicin E1 fragment in nanodisc-embedded TolC
Method: single particle / : Kaelber JT, Budiardjo SJ

PDB-6wxh:
Colicin E1 fragment in nanodisc-embedded TolC
Method: single particle / : Kaelber JT, Budiardjo SJ, Firlar E, Case DA, Ikujuni AP, Slusky JSG

PDB-6wxi:
Colicin E1 fragment in nanodisc-embedded TolC
Method: single particle / : Kaelber JT, Budiardjo SJ, Firlar E, Ikujuni AP, Slusky JSG

EMDB-22412:
Adeno-associated virus strain AAV7 capsid icosahedral structure
Method: single particle / : Firlar E, Yost SA

PDB-7jot:
Adeno-associated virus strain AAV7 capsid icosahedral structure
Method: single particle / : Firlar E, Yost SA, Mercer AC, Kaelber JT

EMDB-21386:
Cryo-EM structure of Escherichia coli transcription-translation complex A (TTC-A) containing mRNA with a 12 nt long spacer
Method: single particle / : Molodtsov V, Wang C

EMDB-21468:
Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 15 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Method: single particle / : Molodtsov V, Wang C

EMDB-21469:
Escherichia coli transcription-translation complex A1 (TTC-A1) containing an 18 nt long mRNA spacer, NusG, and fMet-tRNAs at E-site and P-site
Method: single particle / : Molodtsov V, Wang C

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more