[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 8,579 items for (author: fan & j)

EMDB-54381:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

EMDB-54382:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

EMDB-54383:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54385:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

EMDB-54386:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54387:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54388:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54389:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54392:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54393:
Aquifex aeolicus lumazine synthase L121A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54394:
Aquifex aeolicus lumazine synthase I125A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54395:
Aquifex aeolicus lumazine synthase I125A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryi:
Aquifex aeolicus lumazine synthase 12-pentamer cage in complex with I-symmetry-masked riboflavin synthase
Method: single particle / : Koziej L, Azuma Y

PDB-9ryj:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with C5-symmetrized riboflavin synthase C-termini
Method: single particle / : Koziej L, Azuma Y

PDB-9ryk:
Aquifex aeolicus lumazine synthase 11-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

PDB-9rym:
Aquifex aeolicus lumazine synthase 10-pentamer cage in complex with riboflavin synthase trimer
Method: single particle / : Koziej L, Azuma Y

PDB-9ryn:
Aquifex aeolicus lumazine synthase 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryo:
Aquifex aeolicus lumazine synthase 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryp:
Aquifex aeolicus lumazine synthase R29A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryq:
Aquifex aeolicus lumazine synthase R29A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryu:
Aquifex aeolicus lumazine synthase L121A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryv:
Aquifex aeolicus lumazine synthase L121A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryw:
Aquifex aeolicus lumazine synthase I125A mutant 12-pentamer cage
Method: single particle / : Koziej L, Azuma Y

PDB-9ryx:
Aquifex aeolicus lumazine synthase I125A mutant 11-pentamer cage
Method: single particle / : Koziej L, Azuma Y

EMDB-54255:
Mammalian AP3 complex on tubular membranes (AP3 centered)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54256:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Beta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54257:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Delta interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-54258:
Mammalian AP3 complex on tubular membranes (ARF1 centered Delta-ARF1 dimer-Delta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtw:
Mammalian AP3 complex on tubular membranes (AP3 centered)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtx:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Beta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rty:
Mammalian AP3 complex on tubular membranes (ARF1 centered Beta3-ARF1 dimer-Delta interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

PDB-9rtz:
Mammalian AP3 complex on tubular membranes (ARF1 centered Delta-ARF1 dimer-Delta3 interface)
Method: subtomogram averaging / : Kaufman JGG, Tagiltsev G, Briggs JAG, Owen DJ

EMDB-67871:
DRT4 homohexamer
Method: single particle / : Xiao J, Wang L

EMDB-67946:
DRT4 homohexamer with dGTPaS
Method: single particle / : Xiao J, Wang L

EMDB-67947:
DRT4 homohexamer with dATP
Method: single particle / : Xiao J, Wang L

EMDB-67950:
DRT4 homohexamer with dATP, dGTPaS, SSB, RNA
Method: single particle / : Xiao J, Wang L

EMDB-68056:
DRT4 homohexamer with dATP, SSB
Method: single particle / : Xiao J, Wang L

EMDB-69681:
DRT4 homohexamer with dGTP
Method: single particle / : Wang L, Li J

EMDB-69682:
DRT4 homohexamer with dGTP, GMP
Method: single particle / : Wang L, Li J

EMDB-69683:
DRT4 homohexamer with dGTP, RNA
Method: single particle / : Wang L, Li J

EMDB-69684:
DRT4 homohexamer with dGTP, ssRNA (local refinement)
Method: single particle / : Wang L, Li J

EMDB-69207:
Cryo-EM structure of icosahedrally averaged bacteriophage RAN69 capsid
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69208:
The composite Cryo-EM structure of bacteriophage RAN69 pre-ejectosome-portal complex
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69209:
The consensus Cryo-EM structure of bacteriophage RAN69 pre-ejectosome-portal complex
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69210:
Local refinement of the portal region within the bacteriophage RAN69 pre-ejectosome-portal complex
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69211:
Local refinement of the pre-ejectosome region within the bacteriophage RAN69 pre-ejectosome-portal complex
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69212:
The composite Cryo-EM structure of the tail region of bacteriophage RAN69
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69213:
The consensus Cryo-EM structure of the tail region of bacteriophage RAN69
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69214:
Local refinement of bacteriophage RAN69 portal-tail complex
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

EMDB-69215:
Local refinement of bacteriophage RAN69 tail spike
Method: single particle / : Ruan Z, Hu H, Wang A, Shao Q, Li X, Xie L, Sun Z, Yu J, Fang Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more