[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 107 items for (author: elias & p)

EMDB-52056:
Cryo-EM structure of photosystem II C2S2M2L2 supercomplex from the green alga Chlorella ohadii
Method: single particle / : Kopecny D, Kouril R, Ardhad R, Skalidis I, Kastritis P

PDB-9hd7:
Cryo-EM structure of photosystem II C2S2M2L2 supercomplex from the green alga Chlorella ohadii
Method: single particle / : Kopecny D, Kouril R, Ardhad R, Skalidis I, Kastritis P

EMDB-52135:
HSV-1 Origin Binding Protein in complex with double-stranded DNA recognition sequence OriS with 6 basepairs removed from the AT-rich region
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52136:
Focused map of HSV-1 Origin Binding Protein monomer A in complex with double-stranded DNA recognition sequence OriS with 6 basepairs removed from the AT-rich region
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52137:
Focused map of HSV-1 Origin Binding Protein monomer B in complex with double-stranded DNA recognition sequence OriS with 6 basepairs removed from the AT-rich region
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52145:
HSV-1 Origin Binding Protein in complex with double-stranded DNA recognition sequence OriS and non-hydrolyzable ATP analog
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52146:
Composite map of HSV-1 Origin Binding Protein tetramer in complex with single-stranded DNA recognition sites Box 1 and Box 3 with 10 dT-tail
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52147:
Consensus map of HSV-1 Origin Binding Protein tetramer in complex with single-stranded DNA recognition sites Box 1 and Box 3 with 10 dT-tail
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52148:
Focused map of dimer 1 in HSV-1 Origin Binding Protein tetramer in complex with single-stranded DNA recognition sites Box 1 and Box 3 with 10 dT-tail
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52149:
Focused map of dimer 2 of HSV-1 Origin Binding Protein tetramer in complex with single-stranded DNA recognition sites Box 1 and Box 3 with 10 dT-tail
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52150:
HSV-1 Origin Binding Protein monomer in complex with hairpin DNA OriS recognition sites Box 1 and Box 3 with 10 dT-tail
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

PDB-9hgi:
HSV-1 Origin Binding Protein in complex with double-stranded DNA recognition sequence OriS with 6 basepairs removed from the AT-rich region
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

PDB-9hgj:
HSV-1 Origin Binding Protein in complex with double-stranded DNA recognition sequence OriS and non-hydrolyzable ATP analog
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-52956:
Structure of Cystathionine gamma-lyase with ZHAWOC24000
Method: single particle / : Uchikawa E, Nazi S, So A, Driss E

EMDB-52957:
Structure of Cystathionine gamma-lyase
Method: single particle / : Uchikawa E, Nasi S, So A, Driss A

EMDB-46466:
Map of endoH-treated hemagglutinin A/Sing/INFIMH/16
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

EMDB-46477:
Map of influenza hemagglutinin A/Sing/INFIMH/16 expressed in GntI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

EMDB-46500:
Map of hemagglutinin A/Sing/INFIMH/16 expressed in 293F cells
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

PDB-9d0y:
Map of endoH-treated hemagglutinin A/Sing/INFIMH/16
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

PDB-9d1u:
Map of influenza hemagglutinin A/Sing/INFIMH/16 expressed in GntI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

PDB-9d2m:
Map of hemagglutinin A/Sing/INFIMH/16 expressed in 293F cells
Method: single particle / : Torrents de la Pena A, Ward AB, de Paiva Froes Rocha R

EMDB-45997:
Hemagglutinin A/Hong Kong/1/68 produced in GnTI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

EMDB-45998:
Endo H-treated hemagglutinin A/Hong Kong/1/68
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

PDB-9cxt:
Hemagglutinin A/Hong Kong/1/68 produced in GnTI- cells
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

PDB-9cxu:
Endo H-treated hemagglutinin A/Hong Kong/1/68
Method: single particle / : Torrents de la Pena A, de Paiva Froes Rocha R, Ward AB

EMDB-47016:
Cryo-EM structure of IMPDH2 bound to IMP and GAD
Method: single particle / : Chen YJ, Li B, Parada LF

PDB-9dmu:
Cryo-EM structure of IMPDH2 bound to IMP and GAD
Method: single particle / : Chen YJ, Li B, Parada LF

EMDB-19404:
Cryo-EM structure of the transmembrane anti-sigma factor DdvA
Method: single particle / : Lopez-Alonso JP, Ochoa-Lizarralde B, Tascon I, Ubarretxena-Belandia I

EMDB-19543:
Symmetry expansion of dimeric transmembrane anti-sigma factor DdvA
Method: single particle / : Lopez-Alonso JP, Ochoa-Lizarralde B, Tascon I, Ubarretxena-Belandia I

EMDB-19243:
HCV E1/E2 homodimer complex
Method: single particle / : Augestad EH, Olesen CH, Groenberg C, Soerensen A, Velazquez-Moctezuma R, Fanalista M, Bukh J, Wang K, Gourdon P, Prentoe J

EMDB-19254:
HCV E1/E2 homodimer complex, ectodomain
Method: single particle / : Augestad EH, Olesen CH, Groenberg C, Soerensen A, Velazquez-Moctezuma R, Fanalista M, Bukh J, Wang K, Gourdon P, Prentoe J

PDB-8rjj:
HCV E1/E2 homodimer complex
Method: single particle / : Augestad EH, Olesen CH, Groenberg C, Soerensen A, Velazquez-Moctezuma R, Fanalista M, Bukh J, Wang K, Gourdon P, Prentoe J

PDB-8rk0:
HCV E1/E2 homodimer complex, ectodomain
Method: single particle / : Augestad EH, Olesen CH, Groenberg C, Soerensen A, Velazquez-Moctezuma R, Fanalista M, Bukh J, Wang K, Gourdon P, Prentoe J

EMDB-19599:
Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
Method: subtomogram averaging / : Roske Y, Mikirtumov V, Daumke O, Kudryashev M, Dick A

PDB-8ryt:
Structural characterization of Thogoto Virus nucleoprotein provides insights into RNA encapsidation and assembly
Method: subtomogram averaging / : Roske Y, Mikirtumov V, Daumke O, Kudryashev M, Dick A

EMDB-19837:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state with 1-bp DNA mismatch
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-19838:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state active site with 1-bp DNA mismatch
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-19839:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state with 1-bp DNA mismatch consensus map
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-19840:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state with 1-bp DNA mismatch catalytic core focused map
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-19841:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state with 1-bp DNA mismatch processivity factor focused refinement
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

PDB-9enp:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state with 1-bp DNA mismatch
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

PDB-9enq:
HSV-1 DNA polymerase-processivity factor complex in exonuclease state active site with 1-bp DNA mismatch
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg BM

EMDB-17013:
HSV-1 DNA polymerase-processivity factor complex in halted elongation state consensus map
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg M

EMDB-17014:
Consensus map of HSV-1 DNA polymerase-processivity factor complex in pre-translocation state
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg M

EMDB-17018:
Consensus map of HSV-1 DNA polymerase-processivity factor complex in exonuclease state
Method: single particle / : Gustavsson E, Grunewald K, Elias P, Hallberg M

EMDB-18214:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex - hexameric assembly
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18216:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused cullin dimer
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18217:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused on E2-like density
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18218:
Structure of CUL9-RBX1 ubiquitin E3 ligase complex in unneddylated and neddylated conformation - focused dimeric core
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

EMDB-18220:
Structure of the hexameric CUL9-RBX1 complex with deletion of CUL9 CPH domain
Method: single particle / : Hopf LVM, Horn-Ghetko D, Schulman BA

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more