[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 82 items for (author: echeverria & b)

EMDB-53295:
Ternary complex of translating ribosome, NAC and NMT1
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

EMDB-53296:
Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

PDB-9qqa:
Ternary complex of translating ribosome, NAC and NMT1
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

PDB-9qqb:
Quaternary complex of a translating ribosome, NAC, NMT1, and NatA
Method: single particle / : Echeverria B, Jaskolowski M, Scaiola A, Ban N

EMDB-45406:
Structure of human SLC2A9 transporter
Method: single particle / : Khandelwal NK, Gupta M, Stroud RM

EMDB-45421:
Structure of urate bound human SLC2A9 transporter
Method: single particle / : Khandelwal NK, Gupta M, Stroud RM

PDB-9cax:
Structure of human SLC2A9 transporter
Method: single particle / : Khandelwal NK, Gupta M, Stroud RM

PDB-9cbb:
Structure of urate bound human SLC2A9 transporter
Method: single particle / : Khandelwal NK, Gupta M, Stroud RM

EMDB-45229:
In-cell Toxoplasma gondii nuclear pore complex cytoplasmic ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45230:
In-cell Toxoplasma gondii nuclear pore complex inner ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45231:
In-cell Toxoplasma gondii nuclear pore complex nuclear ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45232:
In-cell Toxoplasma gondii nuclear pore complex membrane focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45233:
In-cell Toxoplasma gondii nuclear pore complex lumenal ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45260:
In-cell Toxoplasma gondii symmetry-expanded nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-44372:
In-cell Saccharomyces cerevisiae nuclear pore complex with single nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-44377:
In-cell Saccharomyces cerevisiae nuclear pore complex with double nuclear ring and basket
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-44379:
In-cell Mus musculus nuclear pore complex with nuclear basket
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-44381:
In-cell Toxoplasma gondii nuclear pore complex
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45197:
In-cell Saccharomyces cerevisiae symmetry-expanded nuclear pore complex with double nuclear ring and basket
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45198:
In-cell Saccharomyces cerevisiae symmetry-expanded nuclear pore complex with single nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45199:
In-cell Saccharomyces cerevisiae nuclear pore complex cytoplasmic ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45200:
In-cell Saccharomyces cerevisiae nuclear pore complex inner ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45201:
In-cell Saccharomyces cerevisiae nuclear pore complex single nuclear ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45202:
In-cell Saccharomyces cerevisiae nuclear pore complex double nuclear ring focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45203:
In-cell Saccharomyces cerevisiae nuclear pore complex nuclear basket focused refinement
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45204:
In-cell Saccharomyces cerevisiae nuclear pore complex membrane focused refinement for single nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45205:
In-cell Saccharomyces cerevisiae nuclear pore complex membrane focused refinement for double nuclear ring
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45216:
In-cell Mus musculus nuclear pore complex with nuclear basket consensus map
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45219:
In-cell Mus musculus nuclear pore complex cytoplasmic ring focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45220:
In-cell Mus musculus nuclear pore complex inner ring focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45222:
In-cell Mus musculus nuclear pore complex nuclear ring focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45223:
In-cell Mus musculus nuclear pore complex basket focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45227:
In-cell Mus musculus nuclear pore complex membrane focused refinement
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45228:
In-cell Toxoplasma gondii symmetry-expanded nuclear pore complex
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-45255:
In-cell Saccharomyces cerevisiae C8-symmetrised nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45256:
In-cell Saccharomyces cerevisiae symmetry-expanded nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Villa E

EMDB-45257:
In-cell Mus musculus nuclear pore complex with nuclear basket consensus map
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45258:
In-cell Mus musculus symmetry-expanded nuclear pore complex with nuclear basket consensus map
Method: subtomogram averaging / : Hutchings J, Singh D, Villa E

EMDB-45259:
In-cell Toxoplasma gondii C8-symmetrised nuclear pore complex consensus map
Method: subtomogram averaging / : Singh D, Hutchings J, Li Z, Guo Q, Villa E

EMDB-41123:
Composite multiscale structure of the yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41114:
Nuclear double outer ring of the yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41116:
Lumenal ring of the isolated yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41117:
Pom34-Pom152 membrane attachment site yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41119:
Cytoplasmic outer ring of the yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41120:
Central transporter/plug yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41121:
Double outer ring connectors of the yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41122:
Connectors in cytoplasmic outer ring of yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41285:
Double nuclear outer ring of Nup84-complexes from the yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

EMDB-41300:
Inner spoke ring of the yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

PDB-8t9l:
Pom34-Pom152 membrane attachment site yeast NPC
Method: single particle / : Akey CW, Echeverria I, Ouch C, Fernandez-Martinez J, Rout MP

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more