[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 1,619 items for (author: dai & a)

EMDB-65801:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1.5 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65802:
Cryo-EM structure of SARS-CoV-2 WT 6p spike protein in complex with P5-1C8 IgG (1 IgG)
Method: single particle / : Lv NN, Yang RY

EMDB-65803:
Immune complex of P5-1C8 Fab binding the RBD of Omicron JN.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65804:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (2 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65805:
Immune complex of P5-1C8 Fab binding the RBD of Omicron BA.1 6p spike protein (1 Fab)
Method: single particle / : Lv NN, Yang RY

EMDB-65806:
Immune complex of P5-1C8 IgG binding the RBD of Omicron BA.1 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65807:
Immune complex of P5-1C8 Fab binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65808:
Immune complex of P5-1C8 IgG binding the RBD of SARS-CoV-2 WT 6p spike protein
Method: single particle / : Lv NN, Yang RY

EMDB-65070:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

PDB-9vhl:
cryoEM structure of retron-Eco7 complex (form II)
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-62923:
Cryo-EM structure of Shewanella oneidensis MR-1 PilA pili.
Method: helical / : Li DN, Liu C, Li D, Dai B

EMDB-62924:
Cryo-EM structure of Shewanella oneidensis MR-1 MshA pili.
Method: helical / : Li DN, Liu C, Li D, Dai B

EMDB-62928:
Cryo-EM structure of Shewanella oneidensis MR-1 flagella.
Method: helical / : Li DN, Liu C, Li D, Dai B

EMDB-65211:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

EMDB-65213:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

EMDB-65214:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnk:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph2
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnm:
Cryo-EM structure of hnRAC1-2,8beta fibril polymorph1
Method: helical / : Li YS, Li DN, Dai B

PDB-9vnn:
Cryo-EM structure of hnRAC1-2,8homobeta fibril
Method: helical / : Li YS, Li DN, Dai B

EMDB-65064:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

PDB-9vhe:
cryoEM structure of retron-Eco7 complex
Method: single particle / : Dai ZK, Wang YJ, Guan ZY, Zou TT

EMDB-62779:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 2
Method: helical / : Zhang YL, Dai B

PDB-9l2s:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 2
Method: helical / : Zhang YL, Dai B

EMDB-64501:
Structure of Fks1 in complex with YMR295C
Method: single particle / : Li JL, Zhu AQ, Wang X, Yan CY, Deng D

EMDB-64502:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

PDB-9utu:
Structure of Fks1 in complex with YMR295C
Method: single particle / : Li JL, Zhu AQ, Wang X, Yan CY, Deng D

PDB-9utw:
Structure of dimeric FKS1 in complex with tRNA
Method: single particle / : Li JL, Zhu AQ, Liu JX, Dai XL, Wang X, Yan CY, Deng D

EMDB-62666:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 3
Method: helical / : Zhang YL, Dai B

PDB-9kzo:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 3
Method: helical / : Zhang YL, Dai B

EMDB-62658:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 1
Method: helical / : Zhang YL, Dai B

PDB-9kzb:
Cryo-EM structure of amyloid peptide-silk block protein fibril, Type 1
Method: helical / : Zhang YL, Dai B

EMDB-70562:
Cryo-EM structure of human SV2A in the apo state
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70563:
Cryo-EM structure of human SV2A in complex with levetiracetam
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70564:
Cryo-EM structure of human SV2A in complex with UCBJ
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70565:
Cryo-EM structure of human SV2A in complex with UCBJ and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-70566:
Cryo-EM structure of human SV2A in complex with padsevonil
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-71812:
Cryo-EM structure of human SV2A in complex with Levetiracetam and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okf:
Cryo-EM structure of human SV2A in the apo state
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okg:
Cryo-EM structure of human SV2A in complex with levetiracetam
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okh:
Cryo-EM structure of human SV2A in complex with UCBJ
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9oki:
Cryo-EM structure of human SV2A in complex with UCBJ and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9okj:
Cryo-EM structure of human SV2A in complex with padsevonil
Method: single particle / : Pidathala S, Dai Y, Lee CH

PDB-9prs:
Cryo-EM structure of human SV2A in complex with Levetiracetam and UCB1244283
Method: single particle / : Pidathala S, Dai Y, Lee CH

EMDB-62848:
Structure of Ro60 dimer from Thermus phage phiLo
Method: single particle / : Hu Z, Huang Y

PDB-9l5y:
Structure of Ro60 dimer from Thermus phage phiLo
Method: single particle / : Hu Z, Huang Y

EMDB-62386:
Structure of the human 40S ribosome complexed with HCV IRES and eIF3
Method: single particle / : Iwasaki W, Kashiwagi K, Sakamoto A, Nishimoto M, Takahashi M, Machida K, Imataka H, Matsumoto A, Shichino Y, Iwasaki S, Imami K, Ito T

EMDB-62453:
Structure of the human 40S ribosome complexed with HCV IRES, eIF1A and eIF3
Method: single particle / : Iwasaki W, Kashiwagi K, Sakamoto A, Nishimoto M, Takahashi M, Machida K, Imataka H, Matsumoto A, Shichino Y, Iwasaki S, Imami K, Ito T

EMDB-62454:
Structure of the HCV IRES-dependent pre-48S translation initiation complex with eIF1A, eIF5B, and eIF3
Method: single particle / : Iwasaki W, Kashiwagi K, Sakamoto A, Nishimoto M, Takahashi M, Machida K, Imataka H, Matsumoto A, Shichino Y, Iwasaki S, Imami K, Ito T

EMDB-62535:
Structure of the HCV IRES-dependent 48S translation initiation complex with eIF5B and eIF3
Method: single particle / : Iwasaki W, Kashiwagi K, Sakamoto A, Nishimoto M, Takahashi M, Machida K, Imataka H, Matsumoto A, Shichino Y, Iwasaki S, Imami K, Ito T

EMDB-62671:
Cryo-EM structure of the HCV IRES-dependently initiated CMV-stalled 80S ribosome (non-rotated state) in complexed with eIF3
Method: single particle / : Iwasaki W, Kashiwagi K, Sakamoto A, Nishimoto M, Takahashi M, Machida K, Imataka H, Matsumoto A, Shichino Y, Iwasaki S, Imami K, Ito T

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more