[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 187 items for (author: cheung & j)

EMDB-59152:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

PDB-32to:
T. cruzi topoisomerase II alpha bound to dsDNA and the covalent inhibitor IID432
Method: single particle / : Schenk A, Deniston C

EMDB-76971:
Cryo-EM structure of an intact human acetylcholinesterase (T-form) tetramer in complex with ColQ
Method: single particle / : Cheung J, Karasawa A

EMDB-76975:
Cryo-EM structure of an intact human acetylcholinesterase (T-form) tetramer in complex with PRiMA
Method: single particle / : Cheung J, Karasawa A

PDB-13co:
Cryo-EM structure of an intact human acetylcholinesterase (T-form) tetramer in complex with ColQ
Method: single particle / : Cheung J, Karasawa A

PDB-13cp:
Cryo-EM structure of an intact human acetylcholinesterase (T-form) tetramer in complex with PRiMA
Method: single particle / : Cheung J, Karasawa A

EMDB-72134:
HUWE1-Ub consensus refinement map
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-72135:
HUWE1-Ub local refinement on HECT domain
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-72139:
Consensus HUWE1-USP7 refinement
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-72140:
HUWE1-USP7 local refinement, with focus on US7 catalytic domain
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-72141:
HUWE1-USP7 local refinement, focusing on USP7 Ubl1,2 domains
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-72142:
HUWE1-USP7 local refinement, with focus on USP7 Ubl4,5 domains
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-72968:
6.9 A map of 3 x FBXO42-SKP1 bound to CCDC6-PP2Ac
Method: single particle / : Michaelian N, Azumaya CM, Hsu PL

EMDB-71720:
HUWE1(CS)-Ubiquitin bound to the HECT domain
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-71721:
CryoEM reconstruction of HUWE1-USP7 complex in the closed state
Method: single particle / : Yatskevich S, Juszkiewicz S

PDB-9plq:
HUWE1(CS)-Ubiquitin bound to the HECT domain
Method: single particle / : Yatskevich S, Juszkiewicz S

PDB-9plr:
CryoEM reconstruction of HUWE1-USP7 complex in the closed state
Method: single particle / : Yatskevich S, Juszkiewicz S

EMDB-49966:
CryoEM structure of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49974:
Focused refinement of FBXO42-CCDC6-PP2Ac degradasome PP2Ac repeat4
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49975:
Focused refinement of PP2Ac repeats 3 and 4 in FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49977:
Focused refinement of PP2Ac repeats 2 and 3 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49978:
Focused refinement of PP2Ac repeats 1, 2, 3 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49979:
Focused refinement of PP2Ac repeats 1 and 2 of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49980:
Focused refinement of PP2Ac repeat 1 in the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49981:
Focused refinement of PP2Ac repeat3 and 1 FBXO42 in the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49982:
Focused refinement of PP2Ac repeat 3 and 2 FBXO42 in the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49983:
Consensus map for the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-49992:
CryoEM structure of the CCDC6-PP2Ac multimer
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

PDB-9o04:
CryoEM structure of the FBXO42-CCDC6-PP2Ac degradasome
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

PDB-9o0l:
CryoEM structure of the CCDC6-PP2Ac multimer
Method: single particle / : Hsu PL, Michaelian N, Azumaya C, Coassolo S, Yauch RL

EMDB-53945:
Co-chaperone Bag1-bound human 26S proteasome in SBag2 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52097:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52193:
Co-chaperone Bag1-bound human 26S proteasome in SBAG2 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52194:
Co-chaperone Bag1-bound human 26S proteasome in SBAG3 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52195:
Hsp70-NBD:Bag1:Rpn1 ternary complex class 1
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-52196:
Hsp70-NBD:Bag1:Rpn1 ternary complex class 2
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

PDB-9heu:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

PDB-9szt:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1.2 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

PDB-9szv:
Co-chaperone Bag1-bound human 26S proteasome in SBAG1.3 state
Method: single particle / : Cheng TC, Sakata E, Muntaner J, Maestro-Lopez M, Cuellar J, Valpuesta JM

EMDB-67283:
C1 Symmetry of DNA tesseract
Method: single particle / : Shiu SCC

EMDB-67284:
Octahedral Symmetry of DNA Tesseract
Method: single particle / : Shiu SCC

EMDB-63944:
Microtubule doublet from wild-type mouse tracheal epithelial cells
Method: subtomogram averaging / : Zhang Y, Ni T, He M, Park HJ, Choi MJ, Cheung HO

EMDB-63946:
microtubule doublet from Kif27-/- mouse tracheal epithelial cells
Method: subtomogram averaging / : Zhang Y, Ni T, He M, Park HJ, Choi MJ, Cheung HO

EMDB-49119:
PROTAC-induced IRE1 ternary complex
Method: single particle / : Du J, Johnson M, Azumaya C, Rohou A, Hsu PL, Ashkenazi A

PDB-9n88:
PROTAC-induced IRE1 ternary complex
Method: single particle / : Du J, Johnson M, Azumaya C, Rohou A, Hsu PL, Ashkenazi A

EMDB-62800:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with Ace2 constituent map 1
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-62810:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with ACE2 constituent map 2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-72122:
MS2 bacteriophage coat protein after reassembly as a nanocrate (MS2nc) with no cargo and with waters modeled
Method: single particle / : Zimanyi CM, Bobe D, Jenkins MC, Kopylov M

EMDB-72123:
Mouse apoferritin encapsulated in an MS2-nanocrate: MS2nc@ApoF
Method: single particle / : Kopylov M, Bobe D, Jenkins MC, Zimanyi CM

EMDB-72124:
MS2 bacteriophage coat protein with waters modeled
Method: single particle / : Zimanyi CM, Bobe D, Jenkins MC, Kopylov M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more