[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 400 items for (author: chen & sj)

EMDB-73755:
Cryo-EM structure of human TRPM4 channel in the warm conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73756:
Cryo-EM structure of human TRPM4 channel in the cold conformation in complex with calcium and TPPO at 37 degrees Celsius (monomeric TMD-focused map with best-resolved TPPO density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73754:
Cryo-EM structure of human TRPM4 channel in complex with calcium and TPPO at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73757:
Cryo-EM structure of human TRPM4 channel in complex with calcium and TPPO at 18 degrees Celsius (consensus)
Method: single particle / : Hu J, Lu W, Du J

EMDB-73758:
Cryo-EM structure of human TRPM4 channel in complex with EGTA and TPPO at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73759:
Cryo-EM structure of human TRPM4 channel in complex with calcium and NC1 at 37 degrees Celsius (consensus)
Method: single particle / : Hu J, Lu W, Du J

EMDB-73760:
Cryo-EM structure of human TRPM4 channel in complex with EGTA and NC1 at 37 degrees Celsius (consensus)
Method: single particle / : Hu J, Lu W, Du J

EMDB-73761:
Cryo-EM structure of human TRPM4 channel in complex with calcium and CBA at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73762:
Cryo-EM structure of human TRPM4 channel in complex with calcium and CBA at 37 degrees Celsius (monomeric TMD-focused map with best-resolved CBA density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73763:
Cryo-EM structure of human TRPM4 channel in complex with calcium and NBA at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73764:
Cryo-EM structure of human TRPM4 channel in complex with calcium and NBA at 37 degrees Celsius (monomeric TMD-focused map with best-resolved NBA density)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-73765:
Cryo-EM structure of human TRPM4 channel in complex with calcium and CBA and DVT at 37 degrees Celsius (consensus)
Method: single particle / : Jinhong H, Wei L, Juan D

EMDB-72972:
AM12-340 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-74654:
Cryo-EM structure of SHIV-elicited CE79-1571 Fab in complex with HIV Env trimer Q23-SCT27
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-74655:
Cryo-EM structure of SHIV-elicited CN81-2029 Fab in complex with HIV Env trimer Q23-SCT27
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-74656:
Cryo-EM structure of SHIV-elicited CI93-1365 Fab in complex with HIV Env trimer Q23-SCT27
Method: single particle / : Roark RS, Shapiro LS, Kwong PD

EMDB-72969:
AJ09-21 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72970:
AJ09-83 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72971:
AJ09-110 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72973:
AM12-347 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72985:
AM12-351 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72986:
AM12-352 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72987:
NN39-25 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72988:
NN39-171 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72989:
V634-136 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gristick HB, Gavor E, Bjorkman PJ

EMDB-72990:
V634-136 UCA Fab in complex with HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72991:
V645-158 Fab in complex with HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72992:
HIV-1 Env 5MUT-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72993:
HIV-1 Env del4-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-72994:
HIV-1 Env del8-3fill SOSIP
Method: single particle / : Gavor E, Gristick HB, Bjorkman PJ

EMDB-64131:
Structure of SARS-CoV-2 spike-CD147 complex at 3.75 Angstroms resolution
Method: single particle / : Zhang SJ, Yang ZW, Lin P, Bian HJ, Zhu P, Zhang L, Chen ZN

EMDB-62593:
A Cryo_EM structure of 5_HT1A complex with 5-Meo-DMT
Method: single particle / : Yuan Q, Li S

EMDB-62594:
A Cryo_EM structure of 5_HT1A complex with TMT
Method: single particle / : Yuan Q, Li S

EMDB-62595:
A Cryo_EM structure of 5_HT1A complex with DMT
Method: single particle / : Yuan Q, Li S

EMDB-70613:
Cryo-EM structure of rhesus antibody V033-Int1 in complex with HIV Env trimer Q23.17 MD39
Method: single particle / : Roark RS, Shapiro L, Kwong PD

EMDB-63017:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C4S4M4-type PSII supercomplex
Method: single particle / : Chen SJB, Wu C, Wu JH, Sui SF, Zhang LX

EMDB-63018:
Coordinates of Cryo-EM structure of the Arabidopsis thaliana C2S2M2-type PSII supercomplex
Method: single particle / : Chen SJB, Wu C, Wu JH, Sui SF, Zhang LX

EMDB-64503:
Bacteroides fragilis T6SS effector-immunity BteO-BtiO complex
Method: single particle / : He J, Gao X

EMDB-60835:
Structure of rat TRPV1 in complex with PSFL426-S5
Method: single particle / : Chen X, Yu Y

EMDB-45474:
Structure of MORC2 PD mutant binding to AMP-PNP
Method: single particle / : Tan W, Shakeel S

EMDB-45475:
MORC2 ATPase dead mutant - S87A
Method: single particle / : Tan W, Shakeel S

EMDB-45476:
MORC2 PD mutant with DNA
Method: single particle / : Tan W, Shakeel S

EMDB-45477:
MORC2 ATPase structure
Method: single particle / : Tan W, Shakeel S

EMDB-45478:
MORC2 ATPase with DNA
Method: single particle / : Tan W, Shakeel S

EMDB-44949:
TXNL1-bound proteasome (focused on TXNL1)
Method: single particle / : Gao J, Yip MCJ, Shao S

EMDB-44952:
TXNL1-bound proteasome
Method: single particle / : Gao J, Yip MCJ, Shao S

EMDB-44910:
M1A Midnolin-Proteasome (with Ubl)
Method: single particle / : Gao J, Yip MCJ, Shao S

EMDB-44927:
M2A Midnolin-Proteasome (translocating)
Method: single particle / : Gao J, Yip MCJ, Shao S

EMDB-44928:
M2A Midnolin Proteasome (translocating, focused on PSMD2)
Method: single particle / : Gao J, Yip MCJ, Shao S

EMDB-44929:
M2B Midnolin-Proteasome (translocating)
Method: single particle / : Gao J, Yip MCJ, Shao S

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more