[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 22 items for (author: briggs & lc)

EMDB-41299:
Structural basis of peptidoglycan synthesis by E. coli RodA-PBP2 complex
Method: single particle / : Nygaard R, Mancia F

EMDB-41303:
Transmembrane map
Method: single particle / : Nygaard R, Mancia F

EMDB-41304:
Periplasmic map
Method: single particle / : Nygaard R, Mancia F

PDB-8tj3:
Structural basis of peptidoglycan synthesis by E. coli RodA-PBP2 complex
Method: single particle / : Nygaard R, Mancia F

EMDB-16703:
HIV-1 mature capsid hexamer from CA-IP6 CLPs
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16704:
HIV-1 mature capsid pentamer from CA-IP6 CLPs
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16705:
HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16706:
HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Nup153 peptide
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16707:
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Nup153 peptide
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16708:
HIV-1 mature capsid hexamer next to pentamer (type I) from CA-IP6 CLPs bound to Nup153 peptide.
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16709:
HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to CPSF6 peptide.
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16710:
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to CPSF6 peptide
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16711:
HIV-1 mature capsid hexamer from CA-IP6 CLPs, bound to Sec24C peptide.
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-16712:
HIV-1 mature capsid pentamer from CA-IP6 CLPs bound to Sec24C peptide
Method: single particle / : Stacey JCV, Briggs JAG

EMDB-11329:
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x2 disulphide-bond mutant, G413C, V987C, single Arg S1/S2 cleavage site)
Method: single particle / : Qu K, Xiong X, Scheres SHW, Briggs JAG

EMDB-11330:
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x1 disulphide-bond mutant, S383C, D985C, K986P, V987P, single Arg S1/S2 cleavage site) in Closed State
Method: single particle / : Qu K, Xiong X, Scheres SHW, Briggs JAG

EMDB-11331:
Structure of Disulphide-stabilized SARS-CoV-2 Spike Protein Trimer (x1 disulphide-bond mutant, S383C, D985C, K986P, V987P, single Arg S1/S2 cleavage site) in Locked State
Method: single particle / : Qu K, Xiong X, Scheres SHW, Briggs JAG

EMDB-11332:
Structure of SARS-CoV-2 Spike Protein Trimer (single Arg S1/S2 cleavage site) in Closed State
Method: single particle / : Qu K, Xiong X, Scheres SHW, Briggs JAG

EMDB-11333:
Structure of SARS-CoV-2 Spike Protein Trimer (K986P, V987P, single Arg S1/S2 cleavage site) in Closed State
Method: single particle / : Qu K, Xiong X, Scheres SHW, Briggs JAG

EMDB-11334:
Structure of SARS-CoV-2 Spike Protein Trimer (K986P, V987P, single Arg S1/S2 cleavage site) in Locked State
Method: single particle / : Qu K, Xiong X, Scheres SHW, Briggs JAG

EMDB-1191:
Conformational changes in the AAA ATPase p97-p47 adaptor complex.
Method: single particle / : Beuron F, Dreveny I, Yuan X, Pye VE, McKeown C, Briggs LC, Cliff MJ, Kaneko Y, Wallis R, Isaacson RL, Ladbury JE, Matthews SJ, Kondo H, Zhang X, Freemont PS

EMDB-1192:
Conformational changes in the AAA ATPase p97-p47 adaptor complex.
Method: single particle / : Beuron F, Dreveny I, Yuan X, Pye VE, McKeown C, Briggs LC, Cliff MJ, Kaneko Y, Wallis R, Isaacson RL, Ladbury JE, Matthews SJ, Kondo H, Zhang X, Freemont PS

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more