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Showing 1 - 50 of 147 items for (author: bashan & a)

EMDB-55067:
CRYO-EM CONSENSUS MAP OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-55068:
CRYO-EM FOCUSED REFINEMENT MAP OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-56552:
CLASS-1_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56554:
CLASS-2_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56555:
CLASS-5_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56556:
CLASS-6_APE_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-56557:
CLASS-7_EP_CRYO-EM CONSENSUS MAP OF LD32CS1C1 EDITED RIBOSOMES IN COMPLEX WITH MRNA AND TRNA
Method: single particle / : Rajan KS, Yonath A

EMDB-57250:
Cryo-EM consensus map of lm32cs1c1 m6 overexpression : class 10
Method: single particle / : Rajan KS, Yoanth A

EMDB-56227:
80S ribosome of WT EBV infected human B-cells
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56228:
Large subunit from the composite map of 80S ribosomes from primary B-cells infected with WT M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56229:
Body of small subunit from the composite map of 80S ribosomes from primary B-cells infected with WT M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56230:
Head of small subunit and E-site tRNA from the composite map of 80S ribosomes from primary B-cells infected with WT M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56231:
central pretuberance of the large subunit from the composite map of 80S ribosomes from primary B-cells infected with WT M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56270:
Large subunit from the composite map of 80S ribosomes from primary B-cells infected with delta v-snoRNA1 M81 Epstein-Barr virus
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56271:
Body of small subunit from the composite map of 80S ribosomes from primary B-cells infected with delta v-snoRNA1 M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56284:
Head of small subunit and E-site tRNA from the composite map of 80S ribosomes from primary B-cells infected with delta v-snoRNA1 M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56285:
E-site tRNA from the composite map of 80S ribosomes from primary B-cells infected with delta v-snoRNA1 M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56532:
Consensus map of 80S ribosomes from primary B-cells infected with delta v-snoRNA1 M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-58934:
Consensus map of 80S ribosomes from primary B-cells infected with WT M81 Epstein-Barr virus.
Method: single particle / : Fedorenko A, Bashan A, Yonath A

PDB-9tt7:
80S ribosome of WT EBV infected human B-cells
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-56286:
80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
Method: single particle / : Fedorenko A, Bashan A, Yonath A

PDB-9tv2:
80S ribosomes from primary B-cells infected with delta v-snoRNA1 EBV
Method: single particle / : Fedorenko A, Bashan A, Yonath A

EMDB-54266:
WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-54267:
RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-54268:
RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9ru8:
WT-HEK 80S ribosome bound to TISU mRNA (WT-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9ru9:
RPS26dC HEK mutant 80S ribosome bound to Kozak mRNA (RPS26dC-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9rua:
RPS26dC HEK mutant 80S ribosome bound to TISU mRNA (RPS26dC-TISU)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-54265:
WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-54269:
WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9ru7:
WT-HEK 80S ribosome bound to Kozak mRNA (WT-Kozak)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

PDB-9ruc:
WT-HEK 80S ribosome bound to H2B mRNA (WT-H2B)
Method: single particle / : Hiregange DG, Fraticelli D, Bashan A, Yonath A, Dikstein R

EMDB-55083:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-55091:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spf:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING N1-METHYLPSEUDOURIDINE
Method: single particle / : Rajan KS, Yonath A

PDB-9spi:
CRYO-EM STRUCTURE OF HUMAN 80S RIBOSOME WITH A/P/E-SITE TRNA AND MRNA CONTAINING URIDINE
Method: single particle / : Rajan KS, Yonath A

EMDB-52769:
70S P. gingivalis ribosome W83 strain consensus map
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52247:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-52258:
CRYO-EM CONSENSUS MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-52259:
CRYO-EM FOCUSED REFINEMENT MAP OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

PDB-9hl9:
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH P/E-site tRNA AND mRNA : LM14Cs1H3 sKO STRAIN
Method: single particle / : Rajan KS, Yonath A

EMDB-52635:
50S subunit of P. gingivalis ribosome with Lefamulin
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52636:
70S P. gingivalis ribosome erm-delta-porN strain consensus map
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52637:
Focus refined 50S map of 70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52638:
Focus refined 30S body map of 70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52639:
Focus refined 30S head map of 70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52640:
70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

EMDB-52641:
Porphyromonas gingivalis 70S ribosome (W83 Strain)
Method: single particle / : Hiregange DG, Bashan A, Yonath A

PDB-9i5t:
50S subunit of P. gingivalis ribosome with Lefamulin
Method: single particle / : Hiregange DG, Bashan A, Yonath A

PDB-9i5v:
70S P. gingivalis ribosome erm-delta-porN strain
Method: single particle / : Hiregange DG, Bashan A, Yonath A

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