[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 2,037 items for (author: bai & y)

EMDB-80928:
Local refinement of the mpox virus A35R protein in complexed with 17H1 Fab
Method: single particle / : Xiao YX, He MZ

PDB-26wc:
Local refinement of the mpox virus A35R protein in complexed with 17H1 Fab
Method: single particle / : Xiao YX, He MZ

EMDB-65411:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65412:
Human cytosolic ribosome in complex with neomycin, class partially rotated state with E/E-site tRNAs, SERBP1 and eEF2
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65413:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class partially rotated state with E/E-site tRNAs, eEF2 and SERBP1
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65414:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class rotated state with A/A-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65415:
Human cytosolic ribosome isolated from 1mM neomycin treated cells, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65416:
Human cytosolic ribosome isolated from 3mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65417:
Human cytosolic ribosome isolated from 3mM antibiotic neomycin treated cells, class partially rotated state with E/E-site tRNAs, eEF2 and SERBP1
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65418:
Human cytosolic ribosome isolated from 3mM neomycin treated cells, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65419:
Human cytosolic ribosome in complex with neomycin, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65420:
Large subunit of human mitoribosome isolated from 1mM neomycin treated cells
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65421:
Human mitoribosome isolated from 1mM neomycin treated cells, class non rotated state with P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65422:
Human mitoribosome isolated from 1mM neomycin treated cells, class non rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65423:
Human mitoribosome isolated from 1mM neomycin treated cells, class partially rotated state with A/A-site and P/P-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65424:
Human mitoribosome isolated from 1mM neomycin treated cells, class partially rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65425:
Human mitoribosome isolated from 1mM neomycin treated cells, class rotated state with P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65426:
Human mitoribosome in complex with neomycin, class non rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65427:
Human mitoribosome in complex with neomycin, class partially rotated state with A/A-site, P/P-site and E/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65428:
Human mitoribosome in complex with neomycin, class partially rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65429:
Human mitoribosome in complex with neomycin, class rotated state
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65431:
Human mitoribosome in complex with neomycin, class rotated state with A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65433:
Cryo-EM map of the human mitoribosome in a non-rotated state, with multiple neomycin molecules bound, featuring A/A-site and P/P-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-65434:
Cryo-EM map of the human cytosolic ribosome in a rotated state, with multiple neomycin molecules bound, featuring A/P-site and P/E-site tRNAs
Method: single particle / : Zhu L, Jia C, Wu M, Li W

EMDB-67558:
Cryo-EM structure of ex vivo Sup35 prion fibrils from yeast carrying "strong" [PSI+] variant
Method: helical / : Chesnokov YM, Burtseva AD, Dergalev AA, Baimukhametov TN, Kushnirov VV, Popov VO, Boyko KM

PDB-21bq:
Cryo-EM structure of ex vivo Sup35 prion fibrils from yeast carrying "strong" [PSI+] variant
Method: helical / : Chesnokov YM, Burtseva AD, Dergalev AA, Baimukhametov TN, Kushnirov VV, Popov VO, Boyko KM

EMDB-54623:
CryoEM structure of WIV1 spike monomer in complex with neutralizing antibody VA14_26
Method: single particle / : Upadhyay A, Alguel Y, Cherepanov P

EMDB-54628:
CryoEM structure of WIV1 spike monomer in complex with neutralizing antibody V1WT_41
Method: single particle / : Upadhyay A, Alguel Y, Cherepanov P

EMDB-54633:
CryoEM structure of WIV1 spike monomer in complex with neutralizing antibody V1WT_06
Method: single particle / : Upadhyay A, Alguel Y, Cherepanov P

EMDB-72771:
Structure of the Adenovirus-7 PB-Fiber
Method: single particle / : Khayat R, Madoo K

EMDB-72772:
Structure of the Adenovirus-7 VLP, Class 4
Method: single particle / : Khayat R, Madoo K

EMDB-72773:
Structure of the Adenovirus-7 VLP, Class 3
Method: single particle / : Khayat R, Madoo K

EMDB-72774:
Structure of the Adenovirus-7 VLP, Class 2
Method: single particle / : Khayat R, Madoo K

EMDB-72793:
Structure of the Adenovirus-7 VLP, Class 1
Method: single particle / : Khayat R, Madoo K

EMDB-72794:
Structure of the Adenovirus-7 VLP
Method: single particle / : Khayat R, Madoo K

PDB-9ych:
Structure of the Adenovirus-7 VLP, Class 4
Method: single particle / : Khayat R, Madoo K

PDB-9yci:
Structure of the Adenovirus-7 VLP, Class 3
Method: single particle / : Khayat R, Madoo K

PDB-9ycj:
Structure of the Adenovirus-7 VLP, Class 2
Method: single particle / : Khayat R, Madoo K

PDB-9yd0:
Structure of the Adenovirus-7 VLP, Class 1
Method: single particle / : Khayat R, Madoo K

EMDB-74415:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74418:
Human cytomegalovirus UL52 3-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-74419:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zly:
HSV-1 UL32 tripentamer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

PDB-9zm2:
Human cytomegalovirus UL52 4-mer
Method: single particle / : Bailey EJ, Devarkar SC, Xiong Y, Didychuk AL

EMDB-68793:
Vpb4Aa2 pore complex in C1 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

EMDB-71647:
Vpb4Aa2 pore complex in C7 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

PDB-22zo:
Single full-length subunit of the Vpb4Aa2 pore complex
Method: single particle / : Wirawan R, Lupton CJ, Venugopal H, Berry C, Dunstone MA, Spicer BA

PDB-9phf:
Vpb4Aa2 pore complex in C7 symmetry
Method: single particle / : Wirawan R, Spicer BA, Lupton CJ, Venugopal H, Berry C, Dunstone MA

EMDB-75506:
Cryo-EM map of Ascl1-E12a in complex with NRCAM nucleosome without scFv
Method: single particle / : Zhou BR, Bai Y

EMDB-52224:
ROCK2 bound with TDI01
Method: single particle / : Aijia W, Shenghai C, Qinghua L, Yan H, Haohao D, Bisen D

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more