[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 3,147 items for (author: amin & m)

EMDB-80383:
Polyrod without P-ring formed by FlgG (G65V) from the Salmonella TH26292 strain
Method: single particle / : Yamaguchi T, Kato T, Minamino T, Namba K

EMDB-55578:
RNA polymerase II bound to Gdown1 and RPAP2 (Pol II core map)
Method: single particle / : Hlavata A, Bernecky C

EMDB-55579:
RNA polymerase II bound to Gdown1 and RPAP2 (Pol II stalk map)
Method: single particle / : Hlavata A, Bernecky C

EMDB-55580:
RNA polymerase II bound to Gdown1 and RPAP2 (RPAP2 map)
Method: single particle / : Hlavata A, Bernecky C

EMDB-55581:
RNA polymerase II bound to Gdown1 and RPAP2 (Gdown1 N-terminus map)
Method: single particle / : Hlavata A, Bernecky C

EMDB-55582:
RNA polymerase II bound to Gdown1 and RPAP2 (Gdown1 C-terminus map)
Method: single particle / : Hlavata A, Bernecky C

EMDB-55583:
RNA polymerase II bound to Gdown1 and RPAP2 (composite map)
Method: single particle / : Hlavata A, Bernecky C

EMDB-55585:
RPAP2-GPN1-GPN3 complex (GDP-bound)
Method: single particle / : Hlavata A, Bernecky C

PDB-9t5h:
RNA polymerase II bound to Gdown1 and RPAP2
Method: single particle / : Hlavata A, Bernecky C

PDB-9t5j:
RPAP2-GPN1-GPN3 complex (GDP-bound)
Method: single particle / : Hlavata A, Bernecky C

EMDB-76165:
Nipah virus fusion protein with 20G7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76168:
Nipah virus fusion protein ectodomain in complex with 8C7 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-76170:
Hendra virus fusion protein ectodomain in complex with 9A9 antibody fab
Method: single particle / : May AJ, Liu K, Acharya P

EMDB-56813:
15-subunit assembly of cyanide dihydratase from Stutzerimonas stutzeri (Pseudomonas stutzeri AK1)
Method: single particle / : Dlamini LS, Harrison P, Quigley A, Sewell BT

PDB-28to:
15-subunit assembly of cyanide dihydratase from Stutzerimonas stutzeri (Pseudomonas stutzeri AK1)
Method: single particle / : Dlamini LS, Harrison P, Quigley A, Sewell BT

EMDB-71429:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71430:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71431:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71432:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71433:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-71434:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa1:
PCP bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa2:
PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa3:
3-OH-PCP bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa4:
(S)-ketamine bound kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa5:
(S)-ketamine bound mu-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

PDB-9pa6:
Ligand-free kappa-opioid receptor in complex with Gi1
Method: single particle / : Jiang QR, Han JM, Fay JF, Che T

EMDB-76879:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (delSagA)
Method: subtomogram averaging / : Park D

EMDB-76880:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (delSagA-complemented)
Method: subtomogram averaging / : Park D

EMDB-76881:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (vancomycin treated)
Method: subtomogram averaging / : Park D

EMDB-76882:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (pghi-4 treated)
Method: subtomogram averaging / : Park D

EMDB-76883:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (vancomycin + pghi-4 treated)
Method: subtomogram averaging / : Park D

EMDB-76884:
Subtomogram averaging of vancomycin-resistant Enterococcus faecium (wt)
Method: subtomogram averaging / : Park D

EMDB-76889:
PRC2(EZH2 S21A) AJ106-350 in the compact active state
Method: single particle / : Matyas MN, Kasinath V, Lewis PW

EMDB-76893:
PRC2(EZH2 S21A) AJ106-350 in the extended active state
Method: single particle / : Matyas MN, Kasinath V, Lewis PW

EMDB-76902:
PRC2(EZH2 WT) AJ106-350 in the compact active state
Method: single particle / : Matyas MN, Kasinath V, Lewis PW

EMDB-76903:
PRC2(EZH2 WT) AJ106-350 in the extended active state
Method: single particle / : Matyas MN, Kasinath V, Lewis PW

EMDB-70949:
Distal Ku-Polymerase lambda BRCT
Method: single particle / : Vogt A, He Y

EMDB-70957:
XRCC4-XLF Scafoold
Method: single particle / : Vogt A, He Y

EMDB-70958:
NHEJ Short-range Pol lambda complex (consensus map)
Method: single particle / : Vogt A, He Y

EMDB-70959:
Proximal Ku-LigIV catalytic domain-Pol lambda BRCT
Method: single particle / : Vogt A, He Y

EMDB-70960:
NHEJ Short-range complex with Polymerase lambda
Method: single particle / : Vogt A, He Y

EMDB-75506:
Cryo-EM map of Ascl1-E12a in complex with NRCAM nucleosome without scFv
Method: single particle / : Zhou BR, Bai Y

EMDB-73364:
Factor XIa in complex with Fab fragment of REGN7508-Cat
Method: single particle / : Saotome K, Franklin MC

EMDB-73374:
Factor XIa in complex with Fab fragment of REGN9933-A2
Method: single particle / : Saotome K, Franklin MC

PDB-9yrb:
Factor XIa in complex with Fab fragment of REGN7508-Cat
Method: single particle / : Saotome K, Franklin MC

PDB-9yrq:
Factor XIa in complex with Fab fragment of REGN9933-A2
Method: single particle / : Saotome K, Franklin MC

EMDB-66677:
Cryo-EM structure of the 90S pre-ribosome (Enp1-Rrp12 WT) from Chaetomium thermophilum, state A
Method: single particle / : Lau B, Li Y, Zhu J, Fischer P, Hong X, Yuan R, Beckmann R, Hurt E, Cheng J

EMDB-66678:
Cryo-EM structure of the 90S pre-ribosome (Enp1-Rrp12 WT) from Chaetomium thermophilum, state B1
Method: single particle / : Lau B, Li Y, Zhu J, Fischer P, Hong X, Yuan R, Beckmann R, Hurt E, Cheng J

EMDB-66679:
Cryo-EM structure of the pre-40S ribosome (Enp1-Rrp12 WT) from Chaetomium thermophilum, state Tsr1-1
Method: single particle / : Lau B, Li Y, Zhu J, Fischer P, Hong X, Yuan R, Beckmann R, Hurt E, Cheng J

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more