[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 497 items for (author: alam & m)

EMDB-55835:
Lysed Roseiflexus cells from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55839:
Roseiflexus cells from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55841:
Roseiflexus cells from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55842:
Roseiflexus cell from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55846:
Roseiflexus cell from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55848:
Roseiflexus cell from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55851:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55852:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55853:
Roseiflexus cell from microbial mat with contracted contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55854:
Calidithermus chliarophilus cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55855:
Deinococcus aquatilis cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55861:
Roseiflexus castenholzii cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55862:
Roseiflexus castenholzii cells with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55870:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55871:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55872:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55873:
Roseiflexus cells from microbial mat with contractile injection systems.
Method: electron tomography / : Gaisin AV

EMDB-55036:
Human TRPM4 ion channel in MSP2N2 lipid nanodisc in a calcium-bound state
Method: single particle / : Pugh CF, Feilen LP, Zivkovic D, Praestegaard KF, Sideris C, Borthwick NJ, de Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE

PDB-9smk:
Human TRPM4 ion channel in MSP2N2 lipid nanodisc in a calcium-bound state
Method: single particle / : Pugh CF, Feilen LP, Zivkovic D, Praestegaard KF, Sideris C, Borthwick NJ, de Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE

EMDB-54226:
NetF pore structure
Method: single particle / : Wang C, Iacovache I, Zuber B

EMDB-54238:
NetF - ANTXR2 structure (C4)
Method: single particle / : Wang C, Iacovache I, Zuber B

EMDB-54245:
NetF - ANTXR2 local refinement focused
Method: single particle / : Wang C, Iacovache I, Zuber B

EMDB-52611:
Human TRPM4 ion channel in MAASTY copolymer lipid nanodisc in a calcium-bound state
Method: single particle / : Pugh CF, Feilen LP, Zivkovic D, Praestegaard KF, Sideris C, Borthwick NJ, De Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE

PDB-9i3r:
Human TRPM4 ion channel in MAASTY copolymer lipid nanodisc in a calcium-bound state
Method: single particle / : Pugh CF, Feilen LP, Zivkovic D, Praestegaard KF, Sideris C, Borthwick NJ, De Lichtenberg C, Bolla JR, Autzen AAA, Autzen HE

EMDB-55203:
Subtomogram average of the 39S mitochondrial ribosome from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55204:
Subtomogram average of the 55S mitochondrial ribosome from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55205:
Subtomogram average of the mtHsp60 singlering complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55206:
Subtomogram average of the mtHsp60:mtHsp10 half-football complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-55207:
Subtomogram average of the mtHsp60:mtHsp10 Football complex from HeLa
Method: subtomogram averaging / : Ehses K, Fernandez-Busnadiego R

EMDB-51890:
ATP-bound human mitochondrial Hsp60-Hsp10 football complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-51891:
ATP-bound human mitochondrial Hsp60-Hsp10 half football complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-51892:
ATP-bound human mitochondrial Hsp60 double-ring complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-51893:
Apo human mitochondrial Hsp60 (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

PDB-9h5s:
ATP-bound human mitochondrial Hsp60-Hsp10 football complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

PDB-9h5t:
ATP-bound human mitochondrial Hsp60-Hsp10 half football complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

PDB-9h5u:
ATP-bound human mitochondrial Hsp60 double-ring complex (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

PDB-9h5v:
Apo human mitochondrial Hsp60 (C1)
Method: single particle / : Lopez-Alonso JP, Tascon I, Ubarretxena-Belandia I

EMDB-48671:
C6 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

EMDB-48677:
D1 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

EMDB-48730:
D7 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gD
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

PDB-9mvu:
C6 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

PDB-9mw5:
D1 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gB
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

PDB-9my8:
D7 Herpes Virus Simplex Neutralizing Nanobody Bound to HSV Glycoprotein gD
Method: single particle / : Viadiu H, Abernathy E, Lee CV, Hung M, Yu Y, Xing W, Yu X

EMDB-46902:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin precursor 5.3
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-47968:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2, open conformation
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9dia:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

PDB-9ef2:
Cryo-EM structure of alpha5beta1 integrin in complex with NeoNectin candidate 2, open conformation
Method: single particle / : Werther R, Nguyen A, Estrada Alamo KA, Wang X, Campbell MG

EMDB-48575:
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

EMDB-48591:
G002-480-0546 Fab in complex with V703-0537_T278M_L14 SOSIP and BG18 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

PDB-9msd:
G002-293-0536 Fab in complex with 001428_T278M_L14 SOSIP and RM20A3 Fab
Method: single particle / : Phulera S, Ozorowski G, Ward AB

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more