[English] 日本語
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 382 items for (author: akashi & s)

EMDB-66703:
Cryo-EM structure of Sup35NM S17R fibril formed at 4 degrees (S17R4N)
Method: helical / : Nomura T, Boyer DR, Tanaka M

EMDB-66704:
Cryo-EM structure of Sup35NM S17R fibril formed at 37 degrees (S17R37N)
Method: helical / : Nomura T, Boyer DR, Tanaka M

EMDB-66705:
Cryo-EM structure of Sup35NM S17R fibril formed at 37 degrees (S17R37C)
Method: helical / : Nomura T, Boyer DR, Tanaka M

EMDB-66706:
Cryo-EM structure of Sup35NM fibril formed at 4 degrees (Sc4)
Method: helical / : Nomura T, Boyer DR, Tanaka M

EMDB-66707:
Cryo-EM structure of Sup35NM fibril formed at 37 degrees (Sc37)
Method: helical / : Nomura T, Boyer DR, Tanaka M

EMDB-66708:
Cryo-EM structure of Sup35NM S17R fibril formed at 4 degrees (S17R4C)
Method: helical / : Nomura T, Boyer DR, Tanaka M

PDB-9xbk:
Cryo-EM structure of Sup35NM S17R fibril formed at 4 degrees (S17R4N)
Method: helical / : Nomura T, Boyer DR, Tanaka M

PDB-9xbl:
Cryo-EM structure of Sup35NM S17R fibril formed at 37 degrees (S17R37N)
Method: helical / : Nomura T, Boyer DR, Tanaka M

PDB-9xbm:
Cryo-EM structure of Sup35NM S17R fibril formed at 37 degrees (S17R37C)
Method: helical / : Nomura T, Boyer DR, Tanaka M

PDB-9xbn:
Cryo-EM structure of Sup35NM fibril formed at 4 degrees (Sc4)
Method: helical / : Nomura T, Boyer DR, Tanaka M

PDB-9xbo:
Cryo-EM structure of Sup35NM fibril formed at 37 degrees (Sc37)
Method: helical / : Nomura T, Boyer DR, Tanaka M

PDB-9xbp:
Cryo-EM structure of Sup35NM S17R fibril formed at 4 degrees (S17R4C)
Method: helical / : Nomura T, Boyer DR, Tanaka M

EMDB-62633:
Structure of human B0AT1-ACE2 complex with compound1
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62634:
Structure of human B0AT1-ACE2 complex with compound3
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62635:
Structure of human B0AT1-ACE2 complex with compound1
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62627:
Structure of human B0AT1-ACE2 complex with compound1
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62628:
Structure of human B0AT1-ACE2 complex with compound 2
Method: single particle / : Hiraizumi M, Miyaguchi I

EMDB-62629:
Structure of human B0AT1-ACE2 complex with compound3
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62630:
Structure of human B0AT1-ACE2
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62631:
Inward-open Structure of human B0AT1
Method: single particle / : Imazu T, Miyaguchi I, Hiraizumi M

EMDB-62632:
Structure of human B0AT1-ACE2 complex with compound1
Method: single particle / : Imazu T, Miyaguchi I

EMDB-66460:
Cryo-EM Structure of human complement C1s CUB domain in complex with RAY121
Method: single particle / : Kawauchi H, Adrian H, Gupta G, Koga H, Fujii T, Fukumura T, Ishino S, Irie M, Torizawa T

PDB-9x1h:
Cryo-EM Structure of human complement C1s CUB domain in complex with RAY121
Method: single particle / : Kawauchi H, Adrian H, Gupta G, Koga H, Fujii T, Fukumura T, Ishino S, Irie M, Torizawa T

EMDB-62800:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with Ace2 constituent map 1
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-62810:
Cryo-EM structure of SARS-CoV-2 S-BQ.1 in complex with ACE2 constituent map 2
Method: single particle / : Hsu HF, Wu MH, Chang YC, Hsu STD

EMDB-62028:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

PDB-9k3t:
Cryo-EM structure of TMPRSS2 in complex with Fab fragments of 752 mAb and 2228 mAb
Method: single particle / : Katsura K, Hisano T, Matsumoto T, Shirouzu M

EMDB-48922:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

PDB-9n5i:
Endogenous Pfs230D13-14 in complex with Pfs48/45 bound to anti-Pfs48/45 Fabs RUPA-71 and RUPA-44
Method: single particle / : Hailemariam S, Heide F, Bekkering E, Ivanochko D, Yoo R, Julien JP

EMDB-48921:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-48924:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

EMDB-48941:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5h:
Endogenous Pfs230D1-6 in complex with RUPA-97, LMIV230-01, and 2A2 Fab domains
Method: single particle / : Heide F, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

PDB-9n5k:
Endogenous Pfs230D9-14 in complex with Pfs48/45
Method: single particle / : Heide F, Ivanochko D, Bekkering E, Yoo R, Hailemariam S, Julien JP

PDB-9n5o:
Endogenous Pfs230D7-8 in complex with 18F25
Method: single particle / : Jackman JJ, Yoo R, Ivanochko D, Hailemariam S, Bekkering E, Julien JP

EMDB-53467:
Composite map of proximal A-C linker of Tetrahymena centriole
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53471:
Composite map of proximal A-C linker of Tetrahymena centriole
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53975:
A-link map of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53977:
A-link and A-microtubule of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53978:
C-link of Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53979:
A-microtubule associated with Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53980:
A05-A09 protofilaments of A-microtubule associated with Tetrahymena proximal A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53981:
A-B inner junction of Tetrahymena centriole triplet
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53982:
B-C inner junction of Tetrahymena centriole triplet, focusing on POC1
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53983:
B-C inner junction of Tetrahymena centriole triplet, focusing on WD40 domain
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53984:
A-link and A-microtubule of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53985:
C-link of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53986:
C-link and C-microtubule of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-53987:
Composite map of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

EMDB-54008:
Consensus refinement of Tetrahymena transitional A-C linker
Method: single particle / : Cai B, Xu JW, Luo L, Aarts E, Leitner A, Ishikawa T, Beltro P, Pilhofer M, Wieczorek M

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242)：Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more