Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2ZRX
DownloadVisualize
BU of 2zrx by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN and DMAPP.
Descriptor: DIMETHYLALLYL DIPHOSPHATE, FLAVIN MONONUCLEOTIDE, Isopentenyl-diphosphate delta-isomerase, ...
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRZ
DownloadVisualize
BU of 2zrz by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and DMAPP
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, DIMETHYLALLYL DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRY
DownloadVisualize
BU of 2zry by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN and IPP.
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRV
DownloadVisualize
BU of 2zrv by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with reduced FMN.
Descriptor: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, Isopentenyl-diphosphate delta-isomerase
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRW
DownloadVisualize
BU of 2zrw by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN and IPP.
Descriptor: FLAVIN MONONUCLEOTIDE, ISOPENTYL PYROPHOSPHATE, Isopentenyl-diphosphate delta-isomerase, ...
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2ZRU
DownloadVisualize
BU of 2zru by Molmil
Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Isopentenyl-diphosphate delta-isomerase
Authors:Unno, H, Yamashita, S, Ikeda, Y, Sekiguchi, S, Yoshida, N, Yoshimura, T, Kusunoki, M, Nakayama, T, Nishino, T, Hemmi, H.
Deposit date:2008-09-01
Release date:2009-01-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:New role of flavin as a general acid-base catalyst with no redox function in type 2 isopentenyl-diphosphate isomerase.
J.Biol.Chem., 284, 2009
2RQV
DownloadVisualize
BU of 2rqv by Molmil
Solution structure of SH3CI domain of Bem1p
Descriptor: Bud emergence protein 1
Authors:Takaku, T, Ogura, K, Inagaki, F.
Deposit date:2009-12-21
Release date:2010-04-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42
J.Biol.Chem., 285, 2010
2RQW
DownloadVisualize
BU of 2rqw by Molmil
Solution structure of Bem1p SH3CI domain complexed with Ste20p-PRR peptide
Descriptor: 24-meric peptide from Serine/threonine-protein kinase STE20, Bud emergence protein 1
Authors:Takaku, T, Ogura, K, Inagaki, F.
Deposit date:2009-12-21
Release date:2010-04-21
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42
J.Biol.Chem., 285, 2010
5B2A
DownloadVisualize
BU of 5b2a by Molmil
Crystal structure of a mutant of OspA
Descriptor: Outer surface protein A
Authors:Hori , Y, Makabe, K.
Deposit date:2016-01-13
Release date:2017-01-18
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J6C
DownloadVisualize
BU of 6j6c by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form3)
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-14
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5M
DownloadVisualize
BU of 6j5m by Molmil
OspA mutant, PSAM-VLGDV1-form3, grafted short chameleon sequence from alpha-B crystallin
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-11
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5N
DownloadVisualize
BU of 6j5n by Molmil
OspA mutant, PSAM-VLGDV1-form4, grafted short chameleon sequence from alpha-B crystallin
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-11
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5Q
DownloadVisualize
BU of 6j5q by Molmil
OspA mutant, PSAM-VLGDV1-form7, grafted short chameleon sequence from alpha-B crystallin
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-11
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.798 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J6E
DownloadVisualize
BU of 6j6e by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form5)
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-14
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5O
DownloadVisualize
BU of 6j5o by Molmil
OspA mutant, PSAM-VLGDV1-form5, grafted short chameleon sequence from alpha-B crystallin
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-11
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J6B
DownloadVisualize
BU of 6j6b by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form2)
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-14
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5P
DownloadVisualize
BU of 6j5p by Molmil
OspA mutant, PSAM-VLGDV1-form6, grafted short chameleon sequence from alpha-B crystallin
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-11
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J5R
DownloadVisualize
BU of 6j5r by Molmil
OspA mutant, PSAM-VLGDV1-form8, grafted short chameleon sequence from alpha-B crystallin
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-11
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
6J6D
DownloadVisualize
BU of 6j6d by Molmil
Borrelia burgdorferi OspA via surface entropy reduction (form4)
Descriptor: Outer surface protein A
Authors:Fujiwara, H, Makabe, K.
Deposit date:2019-01-14
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Beta-sheet elasticity of peptide self-assembly mimic, PSAM, with a grafted sequence characterized by comprehensive analyses of isomorphous crystals
J Mol Liq, 290, 2019
1UEA
DownloadVisualize
BU of 1uea by Molmil
MMP-3/TIMP-1 COMPLEX
Descriptor: CALCIUM ION, MATRIX METALLOPROTEINASE-3, TISSUE INHIBITOR OF METALLOPROTEINASE-1, ...
Authors:Bode, W, Maskos, K, Gomis-Rueth, F.-X, Nagase, H.
Deposit date:1997-06-06
Release date:1998-10-14
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Mechanism of inhibition of the human matrix metalloproteinase stromelysin-1 by TIMP-1.
Nature, 389, 1997
2CZU
DownloadVisualize
BU of 2czu by Molmil
lipocalin-type prostaglandin D synthase
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Kumasaka, T, Irikura, D, Ago, H, Aritake, K, Yamamoto, M, Inoue, T, Miyano, M, Urade, Y, Hayaishi, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-17
Release date:2006-10-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.
J.Biol.Chem., 284, 2009
2CZT
DownloadVisualize
BU of 2czt by Molmil
lipocalin-type prostaglandin D synthase
Descriptor: Prostaglandin-H2 D-isomerase
Authors:Kumasaka, T, Irikura, D, Ago, H, Aritake, K, Yamamoto, M, Inoue, T, Miyano, M, Urade, Y, Hayaishi, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-07-17
Release date:2006-10-03
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the catalytic mechanism operating in open-closed conformers of lipocalin type prostaglandin D synthase.
J.Biol.Chem., 284, 2009

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon