Author results

6Z3V
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A4V MUTANT OF HUMAN SOD1 BOUND WITH N-ARYL BENZOISOSELENAZOLONE DERIVATIVE 13 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, 5-fluoranyl-~{N}-(3-morpholin-4-ylcarbonylphenyl)-2-selanyl-benzamide, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-22
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4G
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A4V MUTANT OF HUMAN SOD1 BOUND WITH EBSELEN IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, ACETATE ION, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4H
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A4V MUTANT OF HUMAN SOD1 BOUND WITH BENZYL BENZOISOSELENAZOLONE DERIVATIVE 2 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, ~{N}-[(4-chlorophenyl)methyl]-2-selanyl-benzamide, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4I
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A4V MUTANT OF HUMAN SOD1 BOUND WITH BENZYL BENZOISOSELENAZOLONE DERIVATIVE 3 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, ACETATE ION, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4J
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A4V MUTANT OF HUMAN SOD1 BOUND WITH BENZYL BENZOISOSELENAZOLONE DERIVATIVE 5 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, ~{N}-[(3-chlorophenyl)methyl]-2-selanyl-benzamide, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4K
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A4V MUTANT OF HUMAN SOD1 BOUND WITH BENZYL BENZOISOSELENAZOLONE DERIVATIVE 6 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ~{N}-[(3-methoxyphenyl)methyl]-2-selanyl-benzamide, ZINC ION, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4L
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A4V MUTANT OF HUMAN SOD1 BOUND WITH 2-(PYRIDIN-3-YLMETHYL)BENZOISOSELENAZOLONE DERIVATIVE 9 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ~{N}-(pyridin-3-ylmethyl)-2-selanyl-benzamide, ZINC ION, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4M
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A4V MUTANT OF HUMAN SOD1 BOUND WITH 2-(PYRIDIN-3-YLMETHYL)BENZOISOSELENAZOLONE DERIVATIVE 10 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ~{N}-[(6-methoxypyridin-3-yl)methyl]-2-selanyl-benzamide, ZINC ION, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6Z4O
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A4V MUTANT OF HUMAN SOD1 BOUND WITH BENZYL BENZOISOSELENAZOLONE DERIVATIVE 1 IN P21 SPACE GROUP
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, ~{N}-(phenylmethyl)-2-selanyl-benzamide, ...
Authors:Amporndanai, K., Hasnain, S.S.
Deposit date:2020-05-25
Release date:2020-09-16
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Novel Selenium-based compounds with therapeutic potential for SOD1-linked amyotrophic lateral sclerosis.
Ebiomedicine, 59, 2020
6LLE
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CRYOEM STRUCTURE OF SERCA2B WT IN E1-2CA2+-AMPPCP STATE.
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION, ...
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-23
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LLY
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CRYOEM STRUCTURE OF SERCA2B WT IN E2-BEF3- STATE
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-24
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN5
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CRYOEM STRUCTURE OF SERCA2B T1032STOP IN E1-2CA2+-AMPPCP (CLASS1)
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION, ...
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN6
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CRYOEM STRUCTURE OF SERCA2B T1032STOP IN E1-2CA2+-AMPPCP (CLASS2)
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION, ...
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN7
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CRYOEM STRUCTURE OF SERCA2B T1032STOP IN E1-2CA2+-AMPPCP (CLASS3)
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, MAGNESIUM ION, ...
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN8
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CRYOEM STRUCTURE OF SERCA2B T1032STOP IN E2-BEF3- STATE (CLASS1)
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
6LN9
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CRYOEM STRUCTURE OF SERCA2B T1032STOP IN E2-BEF3- STATE (CLASS2)
Descriptor:Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION
Authors:Zhang, Y., Tsutsumi, A., Watanabe, S., Inaba, K.
Deposit date:2019-12-28
Release date:2020-08-26
Last modified:2020-09-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Cryo-EM structures of SERCA2b reveal the mechanism of regulation by the luminal extension tail.
Sci Adv, 6, 2020
7C0C
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CRYSTAL STRUCTURE OF AZOSPIRILLUM BRASILENSE L-2-KETO-3-DEOXYARABONATE DEHYDRATASE (APO FORM)
Descriptor:L-2-keto-3-deoxyarabonate dehydratase
Authors:Watanabe, Y., Nobuchi, R., Watanabe, S.
Deposit date:2020-05-01
Release date:2020-08-05
Last modified:2020-09-02
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily.
Biochemistry, 59, 2020
7C0D
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CRYSTAL STRUCTURE OF AZOSPIRILLUM BRASILENSE L-2-KETO-3-DEOXYARABONATE DEHYDRATASE (HYDROXYPYRUVATE-BOUND FORM)
Descriptor:L-2-keto-3-deoxyarabonate dehydratase
Authors:Watanabe, Y., Watanabe, S.
Deposit date:2020-05-01
Release date:2020-08-05
Last modified:2020-09-02
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily.
Biochemistry, 59, 2020
7C0E
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CRYSTAL STRUCTURE OF AZOSPIRILLUM BRASILENSE L-2-KETO-3-DEOXYARABONATE DEHYDRATASE (2-OXOBUTYRATE-BOUND FORM)
Descriptor:L-2-keto-3-deoxyarabonate dehydratase
Authors:Watanabe, Y., Ono, A., Watanabe, S.
Deposit date:2020-05-01
Release date:2020-08-05
Last modified:2020-09-02
Method:X-RAY DIFFRACTION (2.204 Å)
Cite:Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily.
Biochemistry, 59, 2020
7CGQ
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CRYSTAL STRUCTURE OF AZOSPIRILLUM BRASILENSE L-ARABINOSE 1-DEHYDROGENASE E147A MUTANT (NADP AND L-ARABINOSE BOUND FORM)
Descriptor:L-arabinose 1-dehydrogenase (NAD(P)(+)), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, alpha-L-arabinopyranose
Authors:Yoshiwara, K., Watanabe, Y., Watanabe, S.
Deposit date:2020-07-02
Release date:2020-07-29
Last modified:2020-08-12
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Crystal structure of bacterial L-arabinose 1-dehydrogenase in complex with L-arabinose and NADP+
Biochem.Biophys.Res.Commun., 530, 2020
7CGR
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CRYSTAL STRUCTURE OF AZOSPIRILLUM BRASILENSE L-ARABINOSE 1-DEHYDROGENASE E147A MUTANT (NADP AND GLYCEROL BOUND FORM)
Descriptor:L-arabinose 1-dehydrogenase (NAD(P)(+)), NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, GLYCEROL
Authors:Yoshiwara, K., Watanabe, Y., Watanabe, S.
Deposit date:2020-07-02
Release date:2020-07-29
Last modified:2020-08-12
Method:X-RAY DIFFRACTION (2.093 Å)
Cite:Crystal structure of bacterial L-arabinose 1-dehydrogenase in complex with L-arabinose and NADP+
Biochem.Biophys.Res.Commun., 530, 2020
7BYU
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CRYSTAL STRUCTURE OF ACIDOVORAX AVENAE L-FUCOSE MUTAROTASE (APO FORM)
Descriptor:L-fucose mutarotase, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, 1,2-ETHANEDIOL
Authors:Watanabe, Y., Fukui, Y., Watanabe, S.
Deposit date:2020-04-24
Release date:2020-05-27
Last modified:2020-06-24
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Functional and structural characterization of a novel L-fucose mutarotase involved in non-phosphorylative pathway of L-fucose metabolism.
Biochem.Biophys.Res.Commun., 528, 2020
7BYW
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CRYSTAL STRUCTURE OF ACIDOVORAX AVENAE L-FUCOSE MUTAROTASE (L-FUCOSE-BOUND FORM)
Descriptor:L-fucose mutarotase, 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, alpha-L-fucopyranose
Authors:Watanabe, Y., Watanabe, S.
Deposit date:2020-04-24
Release date:2020-05-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Functional and structural characterization of a novel L-fucose mutarotase involved in non-phosphorylative pathway of L-fucose metabolism.
Biochem.Biophys.Res.Commun., 528, 2020
6L06
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI PHOSPHATIDYLSERINE DECARBOXYLASE (APO-FORM)
Descriptor:Phosphatidylserine decarboxylase beta chain, Phosphatidylserine decarboxylase alpha chain
Authors:Watanabe, Y., Watanabe, S.
Deposit date:2019-09-26
Release date:2020-04-15
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis for Phosphatidylethanolamine Biosynthesis by Bacterial Phosphatidylserine Decarboxylase.
Structure, 28, 2020
6L07
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CRYSTAL STRUCTURE OF ESCHERICHIA COLI PHOSPHATIDYLSERINE DECARBOXYLASE (PE-BOUND FORM)
Descriptor:Phosphatidylserine decarboxylase beta chain, Phosphatidylserine decarboxylase alpha chain, 2-azaniumylethyl (2R)-2,3-bis{[(9Z)-octadec-9-enoyl]oxy}propyl phosphate
Authors:Watanabe, Y., Watanabe, S.
Deposit date:2019-09-26
Release date:2020-04-15
Last modified:2020-07-22
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural Basis for Phosphatidylethanolamine Biosynthesis by Bacterial Phosphatidylserine Decarboxylase.
Structure, 28, 2020
171313
PDB entries from 2020-11-18