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11BG
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A POTENTIAL ALLOSTERIC SUBSITE GENERATED BY DOMAIN SWAPPING IN BOVINE SEMINAL RIBONUCLEASE
Descriptor:PROTEIN (BOVINE SEMINAL RIBONUCLEASE), SULFATE ION, URIDYLYL-2'-5'-PHOSPHO-GUANOSINE
Authors:Vitagliano, L., Adinolfi, S., Sica, F., Merlino, A., Zagari, A., Mazzarella, L.
Deposit date:1999-03-11
Release date:1999-11-05
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A potential allosteric subsite generated by domain swapping in bovine seminal ribonuclease.
J.Mol.Biol., 293, 1999
11BA
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BINDING OF A SUBSTRATE ANALOGUE TO A DOMAIN SWAPPING PROTEIN IN THE COMPLEX OF BOVINE SEMINAL RIBONUCLEASE WITH URIDYLYL-2',5'-ADENOSINE
Descriptor:PROTEIN (RIBONUCLEASE, SEMINAL), SULFATE ION, ...
Authors:Vitagliano, L., Adinolfi, S., Riccio, A., Sica, F., Zagari, A., Mazzarella, L.
Deposit date:1999-03-17
Release date:1999-03-26
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Binding of a substrate analog to a domain swapping protein: X-ray structure of the complex of bovine seminal ribonuclease with uridylyl(2',5')adenosine.
Protein Sci., 7, 1998
1G9W
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STRUCTURAL BASIS OF COLLAGEN STABILIZATION INDUCED BY PROLINE HYDROXYLATION
Descriptor:COLLAGEN-LIKE PEPTIDE
Authors:Vitagliano, L., Berisio, R., Mazzarella, L., Zagari, A.
Deposit date:2000-11-28
Release date:2001-04-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural bases of collagen stabilization induced by proline hydroxylation.
Biopolymers, 58, 2001
1JVT
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CRYSTAL STRUCTURE OF RIBONUCLEASE A (LIGAND-FREE FORM)
Descriptor:RIBONUCLEASE A
Authors:Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L.
Deposit date:2001-08-31
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Reversible Substrate-Induced Domain Motions in Ribonuclease A
Proteins, 46, 2002
1JVU
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CRYSTAL STRUCTURE OF RIBONUCLEASE A (COMPLEXED FORM)
Descriptor:RIBONUCLEASE A, CYTIDINE-2'-MONOPHOSPHATE
Authors:Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L.
Deposit date:2001-08-31
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Reversible Substrate-Induced Domain Motions in Ribonuclease A
Proteins, 46, 2002
1JVV
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CRYSTAL STRUCTURE OF RIBONUCLEASE A (RETRO-SOAKED FORM)
Descriptor:RIBONUCLEASE A
Authors:Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L.
Deposit date:2001-08-31
Release date:2002-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reversible Substrate-Induced Domain Motions in Ribonuclease A
Proteins, 46, 2002
3D1K
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R/T INTERMEDIATE QUATERNARY STRUCTURE OF AN ANTARCTIC FISH HEMOGLOBIN IN AN ALPHA(CO)-BETA(PENTACOORDINATE) STATE
Descriptor:Hemoglobin subunit alpha-1, Hemoglobin subunit beta-1/2, ACETYL GROUP, ...
Authors:Vitagliano, L., Vergara, A., Bonomi, G., Merlino, A., Mazzarella, L.
Deposit date:2008-05-06
Release date:2008-08-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Spectroscopic and crystallographic characterization of a tetrameric hemoglobin oxidation reveals structural features of the functional intermediate relaxed/tense state.
J.Am.Chem.Soc., 130, 2008
1EOS
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CRYSTAL STRUCTURE OF RIBONUCLEASE A COMPLEXED WITH URIDYLYL(2',5')GUANOSINE (PRODUCTIVE BINDING)
Descriptor:RIBONUCLEASE PANCREATIC, URIDYLYL-2'-5'-PHOSPHO-GUANOSINE
Authors:Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L.
Deposit date:2000-03-24
Release date:2000-08-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2',5')guanosine.
Protein Sci., 9, 2000
1EOW
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CRYSTAL STRUCTURE OF RIBONUCLEASE A COMPLEXED WITH URIDYLYL(2',5')GUANOSINE (NON-PRODUCTIVE BINDING)
Descriptor:RIBONUCLEASE PANCREATIC, SULFATE ION, URIDYLYL-2'-5'-PHOSPHO-GUANOSINE
Authors:Vitagliano, L., Merlino, A., Zagari, A., Mazzarella, L.
Deposit date:2000-03-24
Release date:2000-11-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Productive and nonproductive binding to ribonuclease A: X-ray structure of two complexes with uridylyl(2',5')guanosine.
Protein Sci., 9, 2000
1S5X
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THE CRYSTAL STRUCTURE OF TREMATOMUS BERNACCHII HEMOGLOBIN OXIDIZED BY AIR
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Vitagliano, L., Bonomi, G., Riccio, A., di Prisco, G., Smulevich, G., Mazzarella, L.
Deposit date:2004-01-22
Release date:2004-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The oxidation process of Antarctic fish hemoglobins
Eur.J.Biochem., 271, 2004
1S5Y
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THE CRYSTAL STRUCTURE OF TREMATOMUS BERNACCHII HEMOGLOBIN OXIDIZED BY FERRICYANIDE
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Vitagliano, L., Bonomi, G., Riccio, A., di Prisco, G., Smulevich, G., Mazzarella, L.
Deposit date:2004-01-22
Release date:2004-05-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The oxidation process of Antarctic fish hemoglobins
Eur.J.Biochem., 271, 2004
1JNY
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CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS ELONGATION FACTOR 1 ALPHA IN COMPLEX WITH GDP
Descriptor:Elongation factor 1-alpha, GUANOSINE-5'-DIPHOSPHATE
Authors:Vitagliano, L., Masullo, M., Sica, F., Zagari, A., Bocchini, V.
Deposit date:2001-07-26
Release date:2002-01-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of Sulfolobus solfataricus elongation factor 1alpha in complex with GDP reveals novel features in nucleotide binding and exchange.
EMBO J., 20, 2001
1SKQ
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THE CRYSTAL STRUCTURE OF SULFOLOBUS SOLFATARICUS ELONGATION FACTOR 1-ALPHA IN COMPLEX WITH MAGNESIUM AND GDP
Descriptor:Elongation factor 1-alpha, MAGNESIUM ION, GUANOSINE-5'-DIPHOSPHATE
Authors:Vitagliano, L., Ruggiero, A., Masullo, M., Cantiello, P., Arcari, P., Zagari, A.
Deposit date:2004-03-05
Release date:2004-07-20
Last modified:2018-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of Sulfolobus solfataricus elongation factor 1alpha in complex with magnesium and GDP.
Biochemistry, 43, 2004
5LFG
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X-RAY STRUCTURE OF A NEW FULLY LIGATED CARBOMONOXY FORM OF TREMATOMUS NEWNESI HEMOGLOBIN (HB1TNCO).
Descriptor:Hemoglobin subunit alpha-1, Hemoglobin subunit beta-1/2, CARBON MONOXIDE, ...
Authors:Vitagliano, L., Mazzarella, L., Merlino, A., Vergara, A.
Deposit date:2016-07-01
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Fine Sampling of the RT Quaternary-Structure Transition of a Tetrameric Hemoglobin.
Chemistry, 23, 2017
1R5C
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X-RAY STRUCTURE OF THE COMPLEX OF BOVINE SEMINAL RIBONUCLEASE SWAPPING DIMER WITH D(CPA)
Descriptor:Ribonuclease, seminal, 2'-DEOXYCYTIDINE-2'-DEOXYADENOSINE-3',5'-MONOPHOSPHATE
Authors:Merlino, A., Vitagliano, L., Sica, F., Zagari, A., Mazzarella, L.
Deposit date:2003-10-10
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer
Biopolymers, 73, 2004
1R5D
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X-RAY STRUCTURE OF BOVINE SEMINAL RIBONUCLEASE SWAPPING DIMER FROM A NEW CRYSTAL FORM
Descriptor:Ribonuclease, seminal
Authors:Merlino, A., Vitagliano, L., Sica, F., Zagari, A., Mazzarella, L.
Deposit date:2003-10-10
Release date:2004-04-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Population shift vs induced fit: The case of bovine seminal ribonuclease swapping dimer
Biopolymers, 73, 2004
1K6F
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CRYSTAL STRUCTURE OF THE COLLAGEN TRIPLE HELIX MODEL [(PRO-PRO-GLY)10]3
Descriptor:collagen triple helix
Authors:Berisio, R., Vitagliano, L., Mazzarella, L., Zagari, A.
Deposit date:2001-10-16
Release date:2002-01-30
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of the collagen triple helix model [(Pro-Pro-Gly)(10)](3)
Protein Sci., 11, 2002
1LA6
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THE CRYSTAL STRUCTURE OF TREMATOMUS NEWNESI HEMOGLOBIN IN A PARTIAL HEMICHROME STATE
Descriptor:Hemoglobin alpha-1 chain, Hemoglobin beta-1/2 chain, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Riccio, A., Vitagliano, L., di Prisco, G., Zagari, A., Mazzarella, L.
Deposit date:2002-03-28
Release date:2002-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The crystal structure of a tetrameric hemoglobin in a partial hemichrome state
Proc.Natl.Acad.Sci.USA, 99, 2002
2H8D
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CRYSTAL STRUCTURE OF DEOXY HEMOGLOBIN FROM TREMATOMUS BERNACCHII AT PH 8.4
Descriptor:Hemoglobin alpha subunit, Hemoglobin beta subunit, POTASSIUM ION, ...
Authors:Mazzarella, L., Vergara, A., Vitagliano, L., Merlino, A., Bonomi, G., Scala, S., Verde, C., di Prisco, G.
Deposit date:2006-06-07
Release date:2006-08-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:High resolution crystal structure of deoxy hemoglobin from Trematomus bernacchii at different pH values: The role of histidine residues in modulating the strength of the root effect.
Proteins, 65, 2006
2H8F
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CRYSTAL STRUCTURE OF DEOXY HEMOGLOBIN FROM TREMATOMUS BERNACCHII AT PH 6.2
Descriptor:Hemoglobin alpha subunit, Hemoglobin beta subunit, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mazzarella, L., Vergara, A., Vitagliano, L., Merlino, A., Bonomi, G., Scala, S., Verde, C., di Prisco, G.
Deposit date:2006-06-07
Release date:2006-08-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:High resolution crystal structure of deoxy hemoglobin from Trematomus bernacchii at different pH values: The role of histidine residues in modulating the strength of the root effect.
Proteins, 65, 2006
2PEG
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CRYSTAL STRUCTURE OF TREMATOMUS BERNACCHII HEMOGLOBIN IN A PARTIAL HEMICHROME STATE
Descriptor:Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE
Authors:Vergara, A., Franzese, M., Merlino, A., Vitagliano, L., Mazzarella, L.
Deposit date:2007-04-03
Release date:2007-07-24
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural characterization of ferric hemoglobins from three antarctic fish species of the suborder notothenioidei.
Biophys.J., 93, 2007
4ESA
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X-RAY STRUCTURE OF CARBONMONOXY HEMOGLOBIN OF ELEGINOPS MACLOVINUS
Descriptor:Hemoglobin alpha chain, Hemoglobin beta chain, CARBON MONOXIDE, ...
Authors:Merlino, A., Vitagliano, L., Mazzarella, L., Vergara, A.
Deposit date:2012-04-23
Release date:2012-11-07
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:ATP regulation of the ligand-binding properties in temperate and cold-adapted haemoglobins. X-ray structure and ligand-binding kinetics in the sub-Antarctic fish Eleginops maclovinus.
Mol Biosyst, 8, 2012
1DY5
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DEAMIDATED DERIVATIVE OF BOVINE PANCREATIC RIBONUCLEASE
Descriptor:RIBONUCLEASE A, SULFATE ION, ACETATE ION, ...
Authors:Esposito, L., Vitagliano, L., Sica, F., Zagari, A., Mazzarella, L.
Deposit date:2000-01-27
Release date:2000-03-28
Last modified:2019-05-22
Method:X-RAY DIFFRACTION (0.87 Å)
Cite:The Ultrahigh Resolution Crystal Structure of Ribonuclease A Containing an Isoaspartyl Residue: Hydration and Sterochemical Analysis.
J.Mol.Biol., 297, 2000
2AA1
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CRYSTAL STRUCTURE OF THE CATHODIC HEMOGLOBIN ISOLATED FROM THE ANTARCTIC FISH TREMATOMUS NEWNESI
Descriptor:Hemoglobin alpha-1 chain, Hemoglobin beta-C chain, PROTOPORPHYRIN IX CONTAINING FE
Authors:Mazzarella, L., Bonomi, G., Lubrano, M.C., Merlino, A., Riccio, A., Vergara, A., Vitagliano, L., Verde, C., Di Prisco, G.
Deposit date:2005-07-13
Release date:2005-08-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Minimal structural requirements for root effect: crystal structure of the cathodic hemoglobin isolated from the antarctic fish Trematomus newnesi
Proteins, 62, 2006
3GKV
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X-RAY STRUCTURE OF AN INTERMEDIATE ALONG THE OXIDATION PATHWAY OF TREMATOMUS BERNACCHII HEMOGLOBIN
Descriptor:Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Merlino, A., Vitagliano, L., Sica, F., Vergara, A., Mazzarella, L.
Deposit date:2009-03-11
Release date:2009-05-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Combined crystallographic and spectroscopic analysis of Trematomus bernacchii hemoglobin highlights analogies and differences in the peculiar oxidation pathway of Antarctic fish hemoglobins
Biopolymers, 91, 2009
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