Author results

1EI1
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DIMERIZATION OF E. COLI DNA GYRASE B PROVIDES A STRUCTURAL MECHANISM FOR ACTIVATING THE ATPASE CATALYTIC CENTER
Descriptor:DNA GYRASE B, SULFATE ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Brino, L., Urzhumtsev, A., Oudet, P., Moras, D.
Deposit date:2000-02-23
Release date:2000-03-31
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dimerization of Escherichia coli DNA-gyrase B provides a structural mechanism for activating the ATPase catalytic center.
J.Biol.Chem., 275, 2000
4B3X
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BACTERIAL TRANSLATION INITIATION FACTOR IF2 (1-363), APO FORM
Descriptor:TRANSLATION INITIATION FACTOR IF-2, GLYCEROL
Authors:Simonetti, A., Urzhumtsev, A., Klaholz, B.P.
Deposit date:2012-07-26
Release date:2013-05-29
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the Protein Core of Translation Initiation Factor 2 in Apo, GTP-Bound and Gdp-Bound Forms
Acta Crystallogr.,Sect.D, 69, 2013
4B43
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BACTERIAL TRANSLATION INITIATION FACTOR IF2 (1-363), APO FORM, DOUBLE MUTANT K86L H130A
Descriptor:TRANSLATION INITIATION FACTOR IF-2, MAGNESIUM ION, GLYCEROL, ...
Authors:Simonetti, A., Urzhumtsev, A., Klaholz, B.P.
Deposit date:2012-07-27
Release date:2013-09-18
Method:X-RAY DIFFRACTION (1.937 Å)
Cite:Molecular Basis of GTP Hydrolysis by Bacterial Translation Initiation Factor If2
To be Published
4B44
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BACTERIAL TRANSLATION INITIATION FACTOR IF2 (1-363), COMPLEX WITH GDP AT PH8.0
Descriptor:TRANSLATION INITIATION FACTOR IF-2, GUANOSINE-5'-DIPHOSPHATE
Authors:Simonetti, A., Urzhumtsev, A., Klaholz, B.P.
Deposit date:2012-07-27
Release date:2013-09-18
Last modified:2015-02-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Basis of GTP Hydrolysis by Bacterial Translation Initiation Factor If2
To be Published
4B47
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BACTERIAL TRANSLATION INITIATION FACTOR IF2 (1-363), COMPLEX WITH GDP AT PH6.5
Descriptor:TRANSLATION INITIATION FACTOR IF-2, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Simonetti, A., Urzhumtsev, A., Klaholz, B.P.
Deposit date:2012-07-27
Release date:2013-05-29
Last modified:2015-02-11
Method:X-RAY DIFFRACTION (2.301 Å)
Cite:Structure of the Protein Core of Translation Initiation Factor 2 in Apo, GTP-Bound and Gdp-Bound Forms
Acta Crystallogr.,Sect.D, 69, 2013
4B48
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BACTERIAL TRANSLATION INITIATION FACTOR IF2 (1-363), COMPLEX WITH GTP
Descriptor:TRANSLATION INITIATION FACTOR IF-2, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Simonetti, A., Urzhumtsev, A., Klaholz, B.P.
Deposit date:2012-07-27
Release date:2013-05-29
Last modified:2013-06-05
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the Protein Core of Translation Initiation Factor 2 in Apo, GTP-Bound and Gdp-Bound Forms
Acta Crystallogr.,Sect.D, 69, 2013
5NDG
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CRYSTAL STRUCTURE OF GENETICIN (G418) BOUND TO THE YEAST 80S RIBOSOME
Descriptor:18S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ...
Authors:Prokhorova, I., Djumagulov, M., Urzhumtsev, A., Yusupov, M., Yusupova, G.
Deposit date:2017-03-08
Release date:2017-12-13
Last modified:2018-04-25
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NDJ
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CRYSTAL STRUCTURE OF AMINOGLYCOSIDE TC007 IN COMPLEX WITH 70S RIBOSOME FROM THERMUS THERMOPHILUS, THREE TRNAS AND MRNA (SOAKING)
Descriptor:16S ribosomal RNA, 50S ribosomal protein L18, 50S ribosomal protein L23, ...
Authors:Prokhorova, I., Djumagulov, M., Urzhumtsev, A., Yusupov, M., Yusupova, G.
Deposit date:2017-03-08
Release date:2018-05-02
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NDK
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CRYSTAL STRUCTURE OF AMINOGLYCOSIDE TC007 CO-CRYSTALLIZED WITH 70S RIBOSOME FROM THERMUS THERMOPHILUS, THREE TRNAS AND MRNA
Descriptor:16S ribosomal RNA, 50S ribosomal protein L18, 50S ribosomal protein L23, ...
Authors:Prokhorova, I., Djumagulov, M., Urzhumtsev, A., Yusupov, M., Yusupova, G.
Deposit date:2017-03-08
Release date:2017-12-13
Last modified:2017-12-27
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NDV
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CRYSTAL STRUCTURE OF PAROMOMYCIN BOUND TO THE YEAST 80S RIBOSOME
Descriptor:25S ribosomal RNA, 5S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Prokhorova, I., Djumagulov, M., Urzhumtsev, A., Yusupov, M., Yusupova, G.
Deposit date:2017-03-09
Release date:2017-12-13
Last modified:2017-12-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5NDW
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CRYSTAL STRUCTURE OF AMINOGLYCOSIDE TC007 BOUND TO THE YEAST 80S RIBOSOME
Descriptor:25S ribosomal RNA, 18S ribosomal RNA, 5S ribosomal RNA, ...
Authors:Prokhorova, I., Djumagulov, M., Urzhumtsev, A., Yusupov, M., Yusupova, G.
Deposit date:2017-03-09
Release date:2017-12-13
Last modified:2017-12-27
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5OBM
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CRYSTAL STRUCTURE OF GENTAMICIN BOUND TO THE YEAST 80S RIBOSOME
Descriptor:25S ribosomal RNA, 5S Ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Prokhorova, I., Djumagulov, M., Urzhumtsev, A., Yusupov, M., Yusupova, G.
Deposit date:2017-06-28
Release date:2017-12-13
Last modified:2017-12-27
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2FQN
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CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING A SITE
Descriptor:5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3', MAGNESIUM ION, COBALT HEXAMMINE(III)
Authors:Kondo, J., Urzhumtsev, A., Westhof, E.
Deposit date:2006-01-18
Release date:2006-02-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Two conformational states in the crystal structure of the Homo sapiens cytoplasmic ribosomal decoding A site.
Nucleic Acids Res., 34, 2006
2G5K
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CRYSTAL STRUCTURE OF THE HOMO SAPIENS CYTOPLASMIC RIBOSOMAL DECODING SITE COMPLEXED WITH APRAMYCIN
Descriptor:5'-R(*UP*UP*GP*CP*GP*UP*CP*GP*CP*UP*CP*CP*GP*GP*AP*AP*AP*AP*GP*UP*CP*GP*C)-3', APRAMYCIN, MAGNESIUM ION, ...
Authors:Kondo, J., Francois, B., Urzhumtsev, A., Westhof, E.
Deposit date:2006-02-23
Release date:2006-06-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of the Homo sapiens Cytoplasmic Ribosomal Decoding Site Complexed with Apramycin
Angew.Chem.Int.Ed.Engl., 45, 2006
1AH4
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PIG ALDOSE REDUCTASE, HOLO FORM
Descriptor:ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Moras, D., Podjarny, A.
Deposit date:1997-04-12
Release date:1998-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A 'specificity' pocket inferred from the crystal structures of the complexes of aldose reductase with the pharmaceutically important inhibitors tolrestat and sorbinil.
Structure, 5, 1997
1AH0
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PIG ALDOSE REDUCTASE COMPLEXED WITH SORBINIL
Descriptor:ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, SORBINIL
Authors:Moras, D., Podjarny, A.D.
Deposit date:1997-04-11
Release date:1998-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A 'specificity' pocket inferred from the crystal structures of the complexes of aldose reductase with the pharmaceutically important inhibitors tolrestat and sorbinil.
Structure, 5, 1997
1AH3
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ALDOSE REDUCTASE COMPLEXED WITH TOLRESTAT INHIBITOR
Descriptor:ALDOSE REDUCTASE, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TOLRESTAT
Authors:Moras, D., Podjarny, A.
Deposit date:1997-04-12
Release date:1998-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A 'specificity' pocket inferred from the crystal structures of the complexes of aldose reductase with the pharmaceutically important inhibitors tolrestat and sorbinil.
Structure, 5, 1997
1ELP
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GAMMA-D CRYSTALLIN STRUCTURE AT 1.95 A RESOLUTION
Descriptor:GAMMA-D CRYSTALLIN
Authors:Chirgadze, Yu.N., Driessen, H.P.C., Wright, G., Slingsby, C., Hay, R.E., Lindley, P.F.
Deposit date:1995-12-20
Release date:1996-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of bovine eye lens gammaD (gammaIIIb)-crystallin at 1.95 A.
Acta Crystallogr.,Sect.D, 52, 1996
1H4A
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HUMAN GAMMAD CRYSTALLIN R58H MUTANT STRUCTURE AT 1.15 A RESOLUTION
Descriptor:Gamma-crystallin D
Authors:Basak, A.K., Slingsby, C.
Deposit date:2003-02-25
Release date:2003-05-08
Last modified:2019-04-03
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:High-Resolution X-Ray Crystal Structures of Human GammaD Crystallin (1.25A) and the R58H Mutant (1.15A) Associated with Aculeiform Cataract
J.Mol.Biol., 328, 2003
2RIK
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I-BAND FRAGMENT I67-I69 FROM TITIN
Descriptor:Titin
Authors:Marino, M., von Castelmur, E., Labeit, D., Labeit, S., Mayans, O.
Deposit date:2007-10-11
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain
Proc.Natl.Acad.Sci.Usa, 105, 2008
2RJM
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3IG STRUCTURE OF TITIN DOMAINS I67-I69 E-TO-A MUTATED VARIANT
Descriptor:Titin
Authors:von Castelmur, E., Marino, M., Labeit, D., Labeit, S., Mayans, O.
Deposit date:2007-10-15
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain
Proc.Natl.Acad.Sci.Usa, 105, 2008
3B43
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I-BAND FRAGMENT I65-I70 FROM TITIN
Descriptor:Titin
Authors:von Castelmur, E., Marino, M., Labeit, D., Labeit, S., Mayans, O.
Deposit date:2007-10-23
Release date:2008-01-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:A regular pattern of Ig super-motifs defines segmental flexibility as the elastic mechanism of the titin chain
Proc.Natl.Acad.Sci.Usa, 105, 2008
4TNH
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RT XFEL STRUCTURE OF PHOTOSYSTEM II IN THE DARK STATE AT 4.9 A RESOLUTION
Descriptor:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
Authors:Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (4.900007 Å)
Cite:Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4TNI
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RT XFEL STRUCTURE OF PHOTOSYSTEM II 500 MS AFTER THE THIRD ILLUMINATION AT 4.6 A RESOLUTION
Descriptor:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
Authors:Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (4.6 Å)
Cite:Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
4TNJ
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RT XFEL STRUCTURE OF PHOTOSYSTEM II 500 MS AFTER THE 2ND ILLUMINATION (2F) AT 4.5 A RESOLUTION
Descriptor:Photosystem Q(B) protein 1, Photosystem II core light harvesting protein, Photosystem II CP43 protein, ...
Authors:Kern, J., Tran, R., Alonso-Mori, R., Koroidov, S., Echols, N., Hattne, J., Ibrahim, M., Gul, S., Laksmono, H., Sierra, R.G., Gildea, R.J., Han, G., Hellmich, J., Lassalle-Kaiser, B., Chatterjee, R., Brewster, A., Stan, C.A., Gloeckner, C., Lampe, A., DiFiore, D., Milathianaki, D., Fry, A.R., Seibert, M.M., Koglin, J.E., Gallo, E., Uhlig, J., Sokaras, D., Weng, T.-C., Zwart, P.H., Skinner, D.E., Bogan, M.J., Messerschmidt, M., Glatzel, P., Williams, G.J., Boutet, S., Adams, P.D., Zouni, A., Messinger, J., Sauter, N.K., Bergmann, U., Yano, J., Yachandra, V.K.
Deposit date:2014-06-04
Release date:2014-07-09
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Taking snapshots of photosynthetic water oxidation using femtosecond X-ray diffraction and spectroscopy.
Nat Commun, 5, 2014
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