Author results

1VCL
  • Download 1vcl
  • View 1vcl
Molmil generated image of 1vcl
CRYSTAL STRUCTURE OF HEMOLYTIC LECTIN CEL-III
Descriptor:hemolytic lectin CEL-III, CALCIUM ION, MAGNESIUM ION, ...
Authors:Uchida, T., Yamasaki, T., Eto, S., Sugawara, H., Kurisu, G., Nakagawa, A., Kusunoki, M., Hatakeyama, T.
Deposit date:2004-03-09
Release date:2004-09-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Hemolytic Lectin CEL-III Isolated from the Marine Invertebrate Cucumaria echinata: IMPLICATIONS OF DOMAIN STRUCTURE FOR ITS MEMBRANE PORE-FORMATION MECHANISM
J.Biol.Chem., 279, 2004
5DE0
  • Download 5de0
  • View 5de0
Molmil generated image of 5de0
DYE-DECOLORIZING PROTEIN FROM V. CHOLERAE
Descriptor:Deferrochelatase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Uchida, T., Sasaki, M., Tanaka, Y., Yao, M.
Deposit date:2015-08-25
Release date:2015-10-21
Last modified:2015-11-11
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A Dye-Decolorizing Peroxidase from Vibrio cholerae.
Biochemistry, 54, 2015
1FJD
  • Download 1fjd
  • View 1fjd
Molmil generated image of 1fjd
HUMAN PARVULIN-LIKE PEPTIDYL PROLYL CIS/TRANS ISOMERASE, HPAR14
Descriptor:PEPTIDYL PROLYL CIS/TRANS ISOMERASE (PPIASE)
Authors:Terada, T., Shirouzu, M., Fukumori, Y., Fujimori, F., Ito, Y., Kigawa, T., Yokoyama, S., Uchida, T., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2000-08-08
Release date:2001-08-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the human parvulin-like peptidyl prolyl cis/trans isomerase, hPar14.
J.Mol.Biol., 305, 2001
2D3A
  • Download 2d3a
  • View 2d3a
Molmil generated image of 2d3a
CRYSTAL STRUCTURE OF THE MAIZE GLUTAMINE SYNTHETASE COMPLEXED WITH ADP AND METHIONINE SULFOXIMINE PHOSPHATE
Descriptor:glutamine synthetase, MANGANESE (II) ION, L-METHIONINE-S-SULFOXIMINE PHOSPHATE, ...
Authors:Unno, H., Uchida, T., Sugawara, H., Kurisu, G., Sugiyama, T., Yamaya, T., Sakakibara, H., Hase, T., Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.63 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3B
  • Download 2d3b
  • View 2d3b
Molmil generated image of 2d3b
CRYSTAL STRUCTURE OF THE MAIZE GLUTAMINE SYNTHETASE COMPLEXED WITH AMPPNP AND METHIONINE SULFOXIMINE
Descriptor:glutamine synthetase, MANGANESE (II) ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Unno, H., Uchida, T., Sugawara, H., Kurisu, G., Sugiyama, T., Yamaya, T., Sakakibara, H., Hase, T., Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
2D3C
  • Download 2d3c
  • View 2d3c
Molmil generated image of 2d3c
CRYSTAL STRUCTURE OF THE MAIZE GLUTAMINE SYNTHETASE COMPLEXED WITH ADP AND PHOSPHINOTHRICIN PHOSPHATE
Descriptor:glutamine synthetase, MANGANESE (II) ION, (2S)-2-AMINO-4-[METHYL(PHOSPHONOOXY)PHOSPHORYL]BUTANOIC ACID, ...
Authors:Unno, H., Uchida, T., Sugawara, H., Kurisu, G., Sugiyama, T., Yamaya, T., Sakakibara, H., Hase, T., Kusunoki, M.
Deposit date:2005-09-26
Release date:2006-07-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.81 Å)
Cite:Atomic Structure of Plant Glutamine Synthetase: A KEY ENZYME FOR PLANT PRODUCTIVITY
J.Biol.Chem., 281, 2006
1RTU
  • Download 1rtu
  • View 1rtu
Molmil generated image of 1rtu
USTILAGO SPHAEROGENA RIBONUCLEASE U2
Descriptor:RIBONUCLEASE U2, SULFATE ION
Authors:Noguchi, S., Satow, Y., Uchida, T., Sasaki, C., Matsuzaki, T.
Deposit date:1995-05-12
Release date:1996-11-08
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Ustilago sphaerogena ribonuclease U2 at 1.8 A resolution.
Biochemistry, 34, 1995
2N9I
  • Download 2n9i
  • View 2n9i
Molmil generated image of 2n9i
SOLUTION STRUCTURE OF REDUCED HUMAN CYTOCHROME C
Descriptor:Cytochrome c, HEME C
Authors:Imai, M., Saio, T., Kumeta, H., Uchida, T., Inagaki, F., Ishimori, K.
Deposit date:2015-11-24
Release date:2016-02-17
Method:SOLUTION NMR
Cite:Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c
Biochem.Biophys.Res.Commun., 469, 2016
2N9J
  • Download 2n9j
  • View 2n9j
Molmil generated image of 2n9j
SOLUTION STRUCTURE OF OXIDIZED HUMAN CYTOCHROME C
Descriptor:Cytochrome c, HEME C
Authors:Imai, M., Saio, T., Kumeta, H., Uchida, T., Inagaki, F., Ishimori, K.
Deposit date:2015-11-24
Release date:2016-02-17
Method:SOLUTION NMR
Cite:Investigation of the redox-dependent modulation of structure and dynamics in human cytochrome c.
Biochem.Biophys.Res.Commun., 469, 2016
2Z48
  • Download 2z48
  • View 2z48
Molmil generated image of 2z48
CRYSTAL STRUCTURE OF HEMOLYTIC LECTIN CEL-III COMPLEXED WITH GALNAC
Descriptor:Hemolytic lectin CEL-III, N-ACETYL-2-DEOXY-2-AMINO-GALACTOSE, N-ACETYL-D-GALACTOSAMINE, ...
Authors:Hatakeyama, T., Unno, H., Eto, S., Hidemura, H., Uchida, T., Kouzuma, Y.
Deposit date:2007-06-13
Release date:2007-10-30
Last modified:2018-07-25
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
2Z49
  • Download 2z49
  • View 2z49
Molmil generated image of 2z49
CRYSTAL STRUCTURE OF HEMOLYTIC LECTIN CEL-III COMPLEXED WITH METHYL-ALPHA-D-GALACTOPYLANOSIDE
Descriptor:Hemolytic lectin CEL-III, ALPHA-METHYL-D-GALACTOSIDE, CALCIUM ION, ...
Authors:Hatakeyama, T., Unno, H., Eto, S., Hidemura, H., Uchida, T., Kouzuma, Y.
Deposit date:2007-06-13
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:C-type lectin-like carbohydrate-recognition of the hemolytic lectin CEL-III containing ricin-type beta-trefoil folds
J.Biol.Chem., 282, 2007
5H6O
  • Download 5h6o
  • View 5h6o
Molmil generated image of 5h6o
PORPHOBILINOGEN DEAMINASE FROM VIBRIO CHOLERAE
Descriptor:Porphobilinogen deaminase, 3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid, MAGNESIUM ION
Authors:Funamizu, T., Chen, M., Tanaka, Y., Ishimori, K., Uchida, T.
Deposit date:2016-11-14
Release date:2017-11-15
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Porphobilinogen deaminase from Vibrio Cholerae
To Be Published
5EXV
  • Download 5exv
  • View 5exv
Molmil generated image of 5exv
CRYSTAL STRUCTURE OF HEME BINDING PROTEIN HUTX FROM VIBRIO CHOLERAE
Descriptor:Hemin-degrading HemS.ChuX domain protein
Authors:Sekine, Y., Tanaka, Y., Uchida, T.
Deposit date:2015-11-24
Release date:2016-07-13
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Cytoplasmic Heme-Binding Protein (HutX) from Vibrio cholerae Is an Intracellular Heme Transport Protein for the Heme-Degrading Enzyme, HutZ
Biochemistry, 55, 2016
4X8Y
  • Download 4x8y
  • View 4x8y
Molmil generated image of 4x8y
CRYSTAL STRUCTURE OF HUMAN PGRMC1 CYTOCHROME B5-LIKE DOMAIN
Descriptor:Membrane-associated progesterone receptor component 1, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nakane, T., Yamamoto, T., Shimamura, T., Kobayashi, T., Kabe, Y., Suematsu, M.
Deposit date:2014-12-11
Release date:2016-03-23
Last modified:2016-03-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance
Nat Commun, 7, 2016
2V1E
  • Download 2v1e
  • View 2v1e
Molmil generated image of 2v1e
CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II - INTERMEDIATE H AT PH 6.8
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, HYDROXIDE ION, ...
Authors:Hersleth, H.-P., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-23
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1F
  • Download 2v1f
  • View 2v1f
Molmil generated image of 2v1f
CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II - INTERMEDIATE H AT PH 8.7
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, HYDROXIDE ION, ...
Authors:Hersleth, H.-P., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1G
  • Download 2v1g
  • View 2v1g
Molmil generated image of 2v1g
CRYSTAL STRUCTURE OF RADIATION-INDUCED MYOGLOBIN COMPOUND II - INTERMEDIATE H AT PH 5.2
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, HYDROXIDE ION, ...
Authors:Hersleth, H.-P., Dalhus, B., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1H
  • Download 2v1h
  • View 2v1h
Molmil generated image of 2v1h
CRYSTAL STRUCTURE OF RADIATION-INDUCED METMYOGLOBIN - AQUA FERROUS MYOGLOBIN AT PH 5.2
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Hersleth, H.-P., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1I
  • Download 2v1i
  • View 2v1i
Molmil generated image of 2v1i
CRYSTAL STRUCTURE OF RADIATION-INDUCED METMYOGLOBIN - AQUA FERROUS MYOGLOBIN AT PH 6.8
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Hersleth, H.-P., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1J
  • Download 2v1j
  • View 2v1j
Molmil generated image of 2v1j
CRYSTAL STRUCTURE OF RADIATION-INDUCED METMYOGLOBIN - AQUA FERROUS MYOGLOBIN AT PH 8.7
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Hersleth, H.-P., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
2V1K
  • Download 2v1k
  • View 2v1k
Molmil generated image of 2v1k
CRYSTAL STRUCTURE OF FERROUS DEOXYMYOGLOBIN AT PH 6.8
Descriptor:MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ...
Authors:Hersleth, H.-P., Gorbitz, C.H., Andersson, K.K.
Deposit date:2007-05-24
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Crystallographic and Spectroscopic Studies of Peroxide-Derived Myoglobin Compound II and Occurrence of Protonated Fe(Iv)-O
J.Biol.Chem., 282, 2007
5B4Z
  • Download 5b4z
  • View 5b4z
Molmil generated image of 5b4z
CRYSTAL STRUCTURE OF HEME BINDING PROTEIN HMUT H141A MUTANT
Descriptor:ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N., Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5B50
  • Download 5b50
  • View 5b50
Molmil generated image of 5b50
CRYSTAL STRUCTURE OF HEME BINDING PROTEIN HMUT Y240A
Descriptor:ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N., Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
5B51
  • Download 5b51
  • View 5b51
Molmil generated image of 5b51
CRYSTAL STRUCTURE OF HEME BINDING PROTEIN HMUT R242A MUTANT
Descriptor:ABC-type transporter, periplasmic component, PROTOPORPHYRIN IX CONTAINING FE
Authors:Muraki, N., Aono, S.
Deposit date:2016-04-20
Release date:2017-03-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural Characterization of Heme Environmental Mutants of CgHmuT that Shuttles Heme Molecules to Heme Transporters
Int J Mol Sci, 17, 2016
1WMY
  • Download 1wmy
  • View 1wmy
Molmil generated image of 1wmy
CRYSTAL STRUCTURE OF C-TYPE LECTIN CEL-I FROM CUCUMARIA ECHINATA
Descriptor:lectin CEL-I, N-acetyl-D-galactosamine-specific C-type, CALCIUM ION, ...
Authors:Sugawara, H., Kusunoki, M., Kurisu, G., Fujimoto, T., Aoyagi, H., Hatakeyama, T.
Deposit date:2004-07-22
Release date:2004-09-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Characteristic Recognition of N-Acetylgalactosamine by an Invertebrate C-type Lectin, CEL-I, Revealed by X-ray Crystallographic Analysis
J.Biol.Chem., 279, 2004
<12>