Author results

1J0D
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ACC DEAMINASE MUTANT COMPLEXED WITH ACC
Descriptor:1-aminocyclopropane-1-carboxylate deaminase, N-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-Y-LMETHYL]-1-AMINO-CYCLOPROPANECARBOXYLIC ACID
Authors:Ose, T., Fujino, A., Yao, M., Honma, M., Tanaka, I.
Deposit date:2002-11-12
Release date:2003-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction
J.BIOL.CHEM., 278, 2003
1J0E
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ACC DEAMINASE MUTANT REACTON INTERMEDIATE
Descriptor:1-aminocyclopropane-1-carboxylate deaminase, PYRIDOXAL-5'-PHOSPHATE, 1-AMINOCYCLOPROPANECARBOXYLIC ACID
Authors:Ose, T., Fujino, A., Yao, M., Honma, M., Tanaka, I.
Deposit date:2002-11-12
Release date:2003-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction
J.BIOL.CHEM., 278, 2003
1IZC
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CRYSTAL STRUCTURE ANALYSIS OF MACROPHOMATE SYNTHASE
Descriptor:macrophomate synthase intermolecular Diels-Alderase, MAGNESIUM ION, PYRUVIC ACID
Authors:Ose, T., Watanabe, K., Mie, T., Honma, M., Watanabe, H., Yao, M., Oikawa, H., Tanaka, I.
Deposit date:2002-10-01
Release date:2003-04-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insight into a natural Diels-Alder reaction from the structure of macrophomate synthase.
Nature, 422, 2003
1V43
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CRYSTAL STRUCTURE OF ATPASE SUBUNIT OF ABC SUGAR TRANSPORTER
Descriptor:sugar-binding transport ATP-binding protein
Authors:Ose, T., Fujie, T., Yao, M., Watanabe, N., Tanaka, I.
Deposit date:2003-11-08
Release date:2004-11-16
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3
Proteins, 57, 2004
1VCI
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CRYSTAL STRUCTURE OF THE ATP-BINDING CASSETTE OF MULTISUGAR TRANSPORTER FROM PYROCOCCUS HORIKOSHII OT3 COMPLEXED WITH ATP
Descriptor:sugar-binding transport ATP-binding protein, ADENOSINE-5'-TRIPHOSPHATE
Authors:Ose, T., Fujie, T., Yao, M., Watanabe, N., Tanaka, I.
Deposit date:2004-03-08
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the ATP-binding cassette of multisugar transporter from Pyrococcus horikoshii OT3
Proteins, 57, 2004
2N37
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SOLUTION STRUCTURE OF AVR-PIA
Descriptor:AVR-Pia protein
Authors:Ose, T., Oikawa, A., Nakamura, Y., Maenaka, K., Higuchi, Y., Satoh, Y., Fujiwara, S., Demura, M., Sone, T.
Deposit date:2015-05-25
Release date:2015-10-14
Method:SOLUTION NMR
Cite:Solution structure of an avirulence protein, AVR-Pia, from Magnaporthe oryzae
J.Biomol.Nmr, 63, 2015
1J0C
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ACC DEAMINASE MUTATED TO CATALYTIC RESIDUE
Descriptor:1-aminocyclopropane-1-carboxylate deaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Ose, T., Fujino, A., Yao, M., Honma, M., Tanaka, I.
Deposit date:2002-11-12
Release date:2003-05-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Reaction intermediate structures of 1-aminocyclopropane-1-carboxylate deaminase: insight into PLP-dependent cyclopropane ring-opening reaction
J.BIOL.CHEM., 278, 2003
1WE5
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CRYSTAL STRUCTURE OF ALPHA-XYLOSIDASE FROM ESCHERICHIA COLI
Descriptor:Putative family 31 glucosidase yicI, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
Authors:Ose, T., Kitamura, M., Okuyama, M., Mori, H., Kimura, A., Watanabe, N., Yao, M., Tanaka, I.
Deposit date:2004-05-24
Release date:2005-02-15
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Alpha-Xylosidase from Escherichia coli
TO BE PUBLISHED
2UWM
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C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA
Descriptor:SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR, 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP *GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3'
Authors:Ose, T., Soler, N., Rasubala, L., Kuroki, K., Kohda, D., Fourmy, D., Yoshizawa, S., Maenaka, K.
Deposit date:2007-03-22
Release date:2007-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural Basis for Dynamic Interdomain Movement and RNA Recognition of the Selenocysteine-Specific Elongation Factor Selb.
Structure, 15, 2007
3A3Q
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STRUCTURE OF N59D HEN EGG-WHITE LYSOZYME IN COMPLEX WITH (GLCNAC)3
Descriptor:Lysozyme C, N-ACETYL-D-GLUCOSAMINE
Authors:Ose, T., Kuroki, K., Matsushima, M., Maenaka, K., Kumagai, I.
Deposit date:2009-06-16
Release date:2009-11-03
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Importance of the hydrogen bonding network including Asp52 for catalysis, as revealed by Asn59 mutant hen egg-white lysozymes
J.Biochem., 146, 2009
3A3R
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STRUCTURE OF N59D HEN EGG-WHITE LYSOZYME
Descriptor:Lysozyme C
Authors:Ose, T., Kuroki, K., Matsushima, M., Maenaka, K., Kumagai, I.
Deposit date:2009-06-16
Release date:2009-11-03
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Importance of the hydrogen bonding network including Asp52 for catalysis, as revealed by Asn59 mutant hen egg-white lysozymes
J.Biochem., 146, 2009
3X1O
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CRYSTAL STRUCTURE OF THE ROQ DOMAIN OF HUMAN ROQUIN
Descriptor:Roquin-1, IODIDE ION
Authors:Ose, T., Verma, A., Cockburn, J.B., Berrow, N.S., Alderton, D., Stuart, D., Owens, R.J., Jones, E.Y.
Deposit date:2014-11-26
Release date:2015-03-11
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Roquin binds microRNA-146a and Argonaute2 to regulate microRNA homeostasis
Nat Commun, 6, 2015
2D7E
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CRYSTAL STRUCTURE OF N-TERMINAL DOMAIN OF PRIA FROM E.COLI
Descriptor:Primosomal protein N'
Authors:Sasaki, K., Ose, T., Maenaka, K., Masai, H., Kohda, D.
Deposit date:2005-11-18
Release date:2006-11-07
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2D7G
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CRYSTAL STRUCTURE OF THE AA COMPLEX OF THE N-TERMINAL DOMAIN OF PRIA
Descriptor:Primosomal protein N', DNA (5'-D(P*AP*A)-3')
Authors:Sasaki, K., Ose, T., Maenaka, K., Masai, H., Kohda, D.
Deposit date:2005-11-21
Release date:2006-11-07
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2D7H
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CRYSTAL STRUCTURE OF THE CCC COMPLEX OF THE N-TERMINAL DOMAIN OF PRIA
Descriptor:Primosomal protein N', DNA (5'-D(P*CP*CP*C)-3')
Authors:Sasaki, K., Ose, T., Maenaka, K., Masai, H., Kohda, D.
Deposit date:2005-11-21
Release date:2006-11-07
Last modified:2019-03-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
5XO2
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CRYSTAL STRUCTURE OF HUMAN PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR ALPHA WITH SYNTHESIZED GLYCOPEPTIDE II
Descriptor:Paired immunoglobulin-like type 2 receptor alpha, Peptide from Envelope glycoprotein B, O-SIALIC ACID, ...
Authors:Furukawa, A., Kakita, K., Yamada, T., Ishizuka, M., Sakamoto, J., Hatori, N., Maeda, N., Ohsaka, F., Saitoh, T., Nomura, T., Kuroki, K., Nambu, H., Arase, H., Matsunaga, S., Anada, M., Ose, T., Hashimoto, S., Maenaka, K.
Deposit date:2017-05-25
Release date:2017-10-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural and thermodynamic analyses reveal critical features of glycopeptide recognition by the human PILR alpha immune cell receptor.
J. Biol. Chem., 292, 2017
5XOF
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CRYSTAL STRUCTURE OF HUMAN PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR ALPHA WITH SYNTHESIZED GLYCOPEPTIDE I
Descriptor:Paired immunoglobulin-like type 2 receptor alpha, Peptide from Nitric oxide synthase, endothelial, ...
Authors:Furukawa, A., Kakita, K., Yamada, T., Ishizuka, M., Sakamoto, J., Hatori, N., Maeda, N., Ohsaka, F., Saitoh, T., Nomura, T., Kuroki, K., Nambu, H., Arase, H., Matsunaga, H., Anada, M., Ose, T., Hashimoto, S., Maenaka, K.
Deposit date:2017-05-28
Release date:2017-10-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (1.963 Å)
Cite:Structural and thermodynamic analyses reveal critical features of glycopeptide recognition by the human PILR alpha immune cell receptor.
J. Biol. Chem., 292, 2017
1WOC
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CRYSTAL STRUCTURE OF PRIB
Descriptor:Primosomal replication protein n
Authors:Shioi, S., Ose, T., Maenaka, K., Abe, Y., Kohda, D., Katayama, T., Ueda, T.
Deposit date:2004-08-13
Release date:2005-01-25
Last modified:2012-12-05
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a biologically functional form of PriB from Escherichia coli reveals a potential single-stranded DNA-binding site
Biochem.Biophys.Res.Commun., 326, 2005
2V1S
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CRYSTAL STRUCTURE OF RAT TOM20-ALDH PRESEQUENCE COMPLEX
Descriptor:MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 HOMOLOG, ALDEHYDE DEHYDROGENASE
Authors:Obita, T., Igura, M., Ose, T., Endo, T., Maenaka, K., Kohda, D.
Deposit date:2007-05-29
Release date:2007-06-12
Last modified:2019-03-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Tom20 Recognizes Mitochondrial Presequences Through Dynamic Equilibrium Among Multiple Bound States.
Embo J., 26, 2007
2V1T
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CRYSTAL STRUCTURE OF RAT TOM20-ALDH PRESEQUENCE COMPLEX
Descriptor:MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 HOMOLOG, ALDEHYDE DEHYDROGENASE
Authors:Obita, T., Igura, M., Ose, T., Endo, T., Maenaka, K., Kohda, D.
Deposit date:2007-05-29
Release date:2007-06-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Tom20 Recognizes Mitochondrial Presequences Through Dynamic Equilibrium Among Multiple Bound States.
Embo J., 26, 2007
3W39
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CRYSTAL STRUCTURE OF HLA-B*5201 IN COMPLEXED WITH HIV IMMUNODOMINANT EPITOPE (TAFTIPSI)
Descriptor:HLA class I histocompatibility antigen, B-52 alpha chain, Beta-2-microglobulin, ...
Authors:Yagita, Y., Kuse, N., Kuroki, K., Gatanaga, H., Carlson, J.M., Chikata, T., Brumme, Z.L., Murakoshi, H., Akahoshi, T., Pfeifer, N., Mallal, S., John, M., Ose, T., Matsubara, H., Kanda, R., Fukunaga, Y., Honda, K., Kawashima, Y., Ariumi, Y., Oka, S., Maenaka, K., Takiguchi, M.
Deposit date:2012-12-13
Release date:2013-02-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Distinct HIV-1 Escape Patterns Selected by Cytotoxic T Cells with Identical Epitope Specificity
J.Virol., 87, 2013
1F2D
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1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE
Descriptor:1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE, SULFATE ION, PYRIDOXAL-5'-PHOSPHATE
Authors:Yao, M., Ose, T., Sugimoto, H., Horiuchi, A., Nakagawa, A., Yokoi, D., Murakami, T., Honma, M., Wakatsuki, S., Tanaka, I.
Deposit date:2000-05-24
Release date:2000-12-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of 1-aminocyclopropane-1-carboxylate deaminase from Hansenula saturnus.
J.Biol.Chem., 275, 2000
2DWL
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CRYSTAL STRUCTURE OF THE PRIA PROTEIN COMPLEXED WITH OLIGONUCLEOTIDES
Descriptor:5'-D(*AP*(DC))-3', Primosomal protein N
Authors:Sasaki, K., Ose, T., Tanaka, T., Masai, H., Maenaka, K., Kohda, D.
Deposit date:2006-08-15
Release date:2006-11-07
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2DWM
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CRYSTAL STRUCTURE OF THE PRIA PROTEIN COMPLEXED WITH OLIGONUCLEOTIDES
Descriptor:5'-D(*AP*T)-3', Primosomal protein N
Authors:Sasaki, K., Ose, T., Tanaka, T., Masai, H., Maenaka, K., Kohda, D.
Deposit date:2006-08-15
Release date:2006-11-07
Last modified:2019-02-27
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
2DWN
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CRYSTAL STRUCTURE OF THE PRIA PROTEIN COMPLEXED WITH OLIGONUCLEOTIDES
Descriptor:Primosomal protein N', DNA (5'-D(*A*G)-3')
Authors:Sasaki, K., Ose, T., Tanaka, T., Masai, H., Maenaka, K., Kohda, D.
Deposit date:2006-08-15
Release date:2006-11-07
Last modified:2019-03-13
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Structural basis of the 3'-end recognition of a leading strand in stalled replication forks by PriA.
EMBO J., 26, 2007
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