1BTC | | THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN | | Descriptor: | BETA-AMYLASE, ALPHA-D-GLUCOSE, SULFATE ION, ... | | Authors: | Mikami, B., Hehre, E.J., Sato, M., Katsube, Y., Hirose, M., Morita, Y., Sacchettini, J.C. | | Deposit date: | 1993-02-18 | | Release date: | 1993-10-31 | | Last modified: | 2017-11-29 | | Method: | X-RAY DIFFRACTION (2 Å) | | Cite: | The 2.0-A resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin.
Biochemistry, 32, 1993
|
|
1BYA | | CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS | | Descriptor: | BETA-AMYLASE, SULFATE ION | | Authors: | Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C. | | Deposit date: | 1994-01-25 | | Release date: | 1994-07-31 | | Last modified: | 2019-08-14 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
|
|
1BYB | | CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS | | Descriptor: | BETA-AMYLASE, ALPHA-D-GLUCOSE, SULFATE ION | | Authors: | Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C. | | Deposit date: | 1994-01-25 | | Release date: | 1994-07-31 | | Last modified: | 2019-08-14 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
|
|
1BYC | | CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS | | Descriptor: | BETA-AMYLASE, ALPHA-D-GLUCOSE, BETA-D-GLUCOSE, ... | | Authors: | Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C. | | Deposit date: | 1994-01-25 | | Release date: | 1994-07-31 | | Last modified: | 2019-08-14 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
|
|
1BYD | | CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS | | Descriptor: | BETA-AMYLASE, 2'-DEOXYMALTOSE, SULFATE ION | | Authors: | Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C. | | Deposit date: | 1994-01-25 | | Release date: | 1994-07-31 | | Last modified: | 2019-08-14 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
|
|
1B1Y | | SEVENFOLD MUTANT OF BARLEY BETA-AMYLASE | | Descriptor: | PROTEIN (BETA-AMYLASE), ALPHA-D-GLUCOSE, BETA-D-GLUCOSE | | Authors: | Mikami, B., Yoon, H.J., Yoshigi, N. | | Deposit date: | 1998-11-25 | | Release date: | 1998-12-02 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | The crystal structure of the sevenfold mutant of barley beta-amylase with increased thermostability at 2.5 A resolution.
J.Mol.Biol., 285, 1999
|
|
1B90 | | BACILLUS CEREUS BETA-AMYLASE APO FORM | | Descriptor: | PROTEIN (BETA-AMYLASE), ACETATE ION, SULFATE ION, ... | | Authors: | Mikami, B., Adachi, M., Kage, T., Sarikaya, E., Nanmori, T., Shinke, R., Utsumi, S. | | Deposit date: | 1999-03-06 | | Release date: | 1999-03-15 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.5 Å) | | Cite: | Structure of raw starch-digesting Bacillus cereus beta-amylase complexed with maltose.
Biochemistry, 38, 1999
|
|
1B9Z | | BACILLUS CEREUS BETA-AMYLASE COMPLEXED WITH MALTOSE | | Descriptor: | PROTEIN (BETA-AMYLASE), MALTOSE, ACETATE ION, ... | | Authors: | Mikami, B., Adachi, M., Kage, T., Sarikaya, E., Nanmori, T., Shinke, R., Utsumi, S. | | Deposit date: | 1999-03-06 | | Release date: | 1999-03-15 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Structure of raw starch-digesting Bacillus cereus beta-amylase complexed with maltose.
Biochemistry, 38, 1999
|
|
1C7G | |
2FGZ | | CRYSTAL STRUCTURE ANALYSIS OF APO PULLULANASE FROM KLEBSIELLA PNEUMONIAE | | Descriptor: | pullulanase, CALCIUM ION | | Authors: | Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D. | | Deposit date: | 2005-12-23 | | Release date: | 2006-06-13 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.75 Å) | | Cite: | Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
|
|
2FH6 | | CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH GLUCOSE | | Descriptor: | pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION | | Authors: | Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D. | | Deposit date: | 2005-12-23 | | Release date: | 2006-06-13 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
|
|
2FH8 | | CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH ISOMALTOSE | | Descriptor: | pullulanase, ALPHA-D-GLUCOSE, BETA-D-GLUCOSE, ... | | Authors: | Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D. | | Deposit date: | 2005-12-23 | | Release date: | 2006-06-13 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (1.9 Å) | | Cite: | Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
|
|
2FHB | | CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH MALTOSE | | Descriptor: | pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION | | Authors: | Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D. | | Deposit date: | 2005-12-23 | | Release date: | 2006-06-13 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (1.8 Å) | | Cite: | Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
|
|
2FHC | | CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH MALTOTRIOSE | | Descriptor: | pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION | | Authors: | Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D. | | Deposit date: | 2005-12-23 | | Release date: | 2006-06-13 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (1.85 Å) | | Cite: | Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
|
|
2FHF | | CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH MALTOTETRAOSE | | Descriptor: | pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION | | Authors: | Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D. | | Deposit date: | 2005-12-23 | | Release date: | 2006-06-13 | | Last modified: | 2017-10-18 | | Method: | X-RAY DIFFRACTION (1.65 Å) | | Cite: | Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
|
|
4E1Y | | ALGINATE LYASE A1-III H192A APO FORM | | Descriptor: | Alginate lyase | | Authors: | Mikami, B., Ban, M., Suzuki, S., Yoon, H.-J., Miyake, O., Yamasaki, M., Ogura, K., Maruyama, Y., Hashimoto, W., Murata, K. | | Deposit date: | 2012-03-07 | | Release date: | 2012-04-11 | | Last modified: | 2012-09-26 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
|
|
4F10 | | ALGINATE LYASE A1-III H192A COMPLEXED WITH TETRASACCHARIDE | | Descriptor: | Alginate lyase, 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid, ALPHA-L-GULURONATE, ... | | Authors: | Mikami, B., Ban, M., Suzuki, S., Yoon, H.-J., Miyake, O., Yamasaki, M., Ogura, K., Maruyama, Y., Hashimoto, W., Murata, K. | | Deposit date: | 2012-05-05 | | Release date: | 2012-06-27 | | Last modified: | 2012-09-26 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
|
|
4F13 | | ALGINATE LYASE A1-III Y246F COMPLEXED WITH TETRASACCHARIDE | | Descriptor: | Alginate lyase, 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid, beta-D-mannuronic acid | | Authors: | Mikami, B., Ban, M., Suzuki, S., Yoon, H.-J., Miyake, O., Yamasaki, M., Ogura, K., Maruyama, Y., Hashimoto, W., Murata, K. | | Deposit date: | 2012-05-06 | | Release date: | 2012-06-27 | | Last modified: | 2012-09-26 | | Method: | X-RAY DIFFRACTION (2.208 Å) | | Cite: | Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
|
|
5EEO | | SOYBEAN LIPOXYGENASE(L1)-T756R | | Descriptor: | Seed linoleate 13S-lipoxygenase-1, FE (II) ION | | Authors: | Mikami, B., Nagaya, T., Hioki, Y. | | Deposit date: | 2015-10-23 | | Release date: | 2015-11-25 | | Last modified: | 2017-11-15 | | Method: | X-RAY DIFFRACTION (2.1 Å) | | Cite: | The structural basis for specificity in lipoxygenase catalysis
To Be Published
|
|
2E8Y | | CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTILIS STR. 168 | | Descriptor: | AmyX protein, CALCIUM ION, ACETATE ION, ... | | Authors: | Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y. | | Deposit date: | 2007-01-24 | | Release date: | 2008-02-19 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.11 Å) | | Cite: | Crystal structure of pullulanase type I from Bacillus subtilis str. 168
in complex with maltose and alpha-cyclodextrin
To be Published
|
|
2E8Z | | CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTILIS STR. 168 COMPLEXED WITH ALPHA-CYCLODEXTRIN | | Descriptor: | AmyX protein, ALPHA-D-GLUCOSE, CALCIUM ION, ... | | Authors: | Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y. | | Deposit date: | 2007-01-24 | | Release date: | 2008-02-19 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structure of pullulanase type I from Bacillus subtilis str. 168 in complex with maltose and alpha-cyclodextrin
To be Published
|
|
2E9B | | CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTILIS STR. 168 COMPLEXED WITH MALTOSE | | Descriptor: | AmyX protein, ALPHA-D-GLUCOSE, CALCIUM ION, ... | | Authors: | Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y. | | Deposit date: | 2007-01-24 | | Release date: | 2008-02-19 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.3 Å) | | Cite: | Crystal structure of pullulanase type I from Bacillus subtilis str. 168 in complex with maltose and alpha-cyclodextrin
To be Published
|
|
2F08 | | CRYSTAL STRUCTURE OF A MAJOR HOUSE DUST MITE ALLERGEN, DERF 2 | | Descriptor: | mite allergen Der f II, O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL | | Authors: | Mikami, B., Tanaka, Y., Minato, N., Suzuki, M., Korematsu, S. | | Deposit date: | 2005-11-12 | | Release date: | 2005-11-29 | | Last modified: | 2011-07-13 | | Method: | X-RAY DIFFRACTION (2.2 Å) | | Cite: | Crystal structure and some properties of a major house dust mite allergen, Derf 2
Biochem.Biophys.Res.Commun., 339, 2006
|
|
5Y6Q | |
5ZU2 | | EFFECT OF MUTATION (R554A) ON FAD MODIFICATION IN ASPERGILLUS ORYZAE RIB40FORMATE OXIDASE | | Descriptor: | formate oxidase, FLAVIN-ADENINE DINUCLEOTIDE, (4S)-2-METHYL-2,4-PENTANEDIOL, ... | | Authors: | Mikami, B., Uchida, H., Doubayashi, D. | | Deposit date: | 2018-05-06 | | Release date: | 2019-05-22 | | Last modified: | 2019-07-17 | | Method: | X-RAY DIFFRACTION (2.441 Å) | | Cite: | The microenvironment surrounding FAD mediates its conversion to 8-formyl-FAD in Aspergillus oryzae RIB40 formate oxidase.
J.Biochem., 166, 2019
|
|
