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5K2L
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BU of 5k2l by Molmil
Crystal structure of LysM domain from Volvox carteri chitinase
Descriptor: 1,2-ETHANEDIOL, Chitinase, lysozyme
Authors:Kitaoku, Y, Numata, T, Fukamizo, T, Ohnuma, T.
Deposit date:2016-05-19
Release date:2017-02-22
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri.
Plant Mol. Biol., 93, 2017
7EBM
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BU of 7ebm by Molmil
W363A mutant of Chitin-specific solute binding protein from Vibrio harveyi in complex with chitobiose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2021-03-10
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
7EBI
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BU of 7ebi by Molmil
Chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitotetraose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2021-03-09
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
5BUM
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BU of 5bum by Molmil
Crystal Structure of LysM domain from Equisetum arvense chitinase A
Descriptor: Chitinase A, SULFATE ION
Authors:Kitaoku, Y, Numata, T, Ohnuma, T, Taira, T, Fukamizo, T.
Deposit date:2015-06-04
Release date:2016-06-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure, mechanism, and phylogeny of LysM-chitinase conjugates specifically found in fern plants.
Plant Sci., 321, 2022
5YZ6
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BU of 5yz6 by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
Descriptor: Chitinase, lysozyme
Authors:Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
Deposit date:2017-12-13
Release date:2018-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
5YZK
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BU of 5yzk by Molmil
Solution structure of LysM domain from a chitinase derived from Volvox carteri
Descriptor: Chitinase, lysozyme
Authors:Kitaoku, Y, Nishimura, S, Fukamizo, T, Ohnuma, T.
Deposit date:2017-12-15
Release date:2018-12-19
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structures and chitin-binding properties of two N-terminal lysin motifs (LysMs) found in a chitinase from Volvox carteri.
Glycobiology, 29, 2019
6LZU
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BU of 6lzu by Molmil
F411A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2020-02-19
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZV
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BU of 6lzv by Molmil
F437A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2020-02-19
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZW
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BU of 6lzw by Molmil
W513A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2020-02-19
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZT
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BU of 6lzt by Molmil
N409A mutant of chitin-specific solute binding protein from Vibrio harveyi co-crystalized with chitobiose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, MAGNESIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2020-02-19
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.853 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
6LZQ
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BU of 6lzq by Molmil
Chitin-specific solute binding protein from Vibrio harveyi in complex with chitotriose.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose, CALCIUM ION, ...
Authors:Kitaoku, Y, Ubonbal, P, Tran, L.T, Robinson, R.C, Suginta, W.
Deposit date:2020-02-19
Release date:2021-02-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A structural model for (GlcNAc) 2 translocation via a periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria.
J.Biol.Chem., 297, 2021
5YLG
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BU of 5ylg by Molmil
Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
Descriptor: 1,2-ETHANEDIOL, Chitinase A, ZINC ION
Authors:Ohnuma, T, Kitaoku, Y, Umemoto, N, Numata, T, Fukamizo, T.
Deposit date:2017-10-17
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Crystal Structure of LysM domain from pteris ryukyuensis chitinase A
To Be Published
4ZXE
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BU of 4zxe by Molmil
X-ray crystal structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5.
Descriptor: 1,2-ETHANEDIOL, Glucanase/Chitosanase, SULFATE ION
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-20
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZY9
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BU of 4zy9 by Molmil
X-ray crystal structure of selenomethionine-labelled V110M mutant of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase/chitosanase
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-21
Release date:2016-04-13
Last modified:2020-02-19
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZZ8
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BU of 4zz8 by Molmil
X-ray crystal structure of chitosan-binding module 2 in complex with chitotriose derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: 1,2-ETHANEDIOL, 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, Glucanase/chitosanase, ...
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-22
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
4ZZ5
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BU of 4zz5 by Molmil
X-ray crystal structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: 1,2-ETHANEDIOL, Glucanase/chitosanase, SULFATE ION
Authors:Shinya, S, Oi, H, Kitaoku, Y, Ohnuma, T, Numata, T, Fukamizo, T.
Deposit date:2015-05-22
Release date:2016-04-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase
Biochem.J., 473, 2016
5YQW
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BU of 5yqw by Molmil
Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria
Descriptor: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, ...
Authors:Suginta, W, Sritho, N, Ranok, A, Kitaoku, Y, Bulmer, D.M, van den Berg, B, Fukamizo, T.
Deposit date:2017-11-08
Release date:2018-02-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marineVibriobacteria.
J. Biol. Chem., 293, 2018
4RL3
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BU of 4rl3 by Molmil
Crystal Structure of the Catalytic Domain of a family GH18 Chitinase from fern, Peteris ryukyuensis
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Chitinase A, ...
Authors:Umemoto, N, Numata, T, Ohnuma, T, Fukamizo, T.
Deposit date:2014-10-15
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:A class III chitinase without disulfide bonds from the fern, Pteris ryukyuensis: crystal structure and ligand-binding studies.
Planta, 242, 2015
6SGF
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BU of 6sgf by Molmil
Molecular insight into a new low affinity xylan binding module CBM86, from the xylanolytic gut symbiont Roseburia intestinalis.
Descriptor: Beta-xylanase, CADMIUM ION, CHLORIDE ION, ...
Authors:Ejby, M, Abou Hachem, M, Leth, M.L, Guskov, A, Slotboom, D.
Deposit date:2019-08-04
Release date:2019-11-20
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.756 Å)
Cite:Molecular insight into a new low-affinity xylan binding module from the xylanolytic gut symbiont Roseburia intestinalis.
Febs J., 287, 2020
2RV9
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BU of 2rv9 by Molmil
Solution structure of chitosan-binding module 1 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase
Authors:Shinya, S, Nishimura, S, Fukamizo, T.
Deposit date:2015-05-12
Release date:2016-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase.
Biochem.J., 473, 2016
2RVA
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BU of 2rva by Molmil
Solution structure of chitosan-binding module 2 derived from chitosanase/glucanase from Paenibacillus sp. IK-5
Descriptor: Glucanase
Authors:Shinya, S, Nishimura, S, Fukamizo, T.
Deposit date:2015-05-13
Release date:2016-04-06
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase.
Biochem.J., 473, 2016
7X56
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BU of 7x56 by Molmil
A CBg-ParM filament with ADP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
7X59
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BU of 7x59 by Molmil
A CBg-ParM filament with GTP or GDPPi
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
7X54
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BU of 7x54 by Molmil
A CBg-ParM filament with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published
7X55
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BU of 7x55 by Molmil
A CBg-ParM filament with GTP and a short incubation time
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, ParM/StbA family protein
Authors:Koh, A, Ali, S, Robinson, R, Narita, A.
Deposit date:2022-03-04
Release date:2023-03-08
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:A new actin-like filament from Clostridium botulinum exhibits a new system of filament turn over
To Be Published

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