Author results

1ZG1
  • Download 1zg1
  • View 1zg1
Molmil generated image of 1zg1
NARL COMPLEXED TO NIRB PROMOTER NON-PALINDROMIC TAIL-TO-TAIL DNA SITE
Descriptor:5'-D(*CP*GP*TP*AP*CP*TP*CP*CP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', 5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*GP*GP*AP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, ...
Authors:Maris, A.E., Kaczor-Grzeskowiak, M., Ma, Z., Kopka, M.L., Gunsalus, R.P., Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1ZG5
  • Download 1zg5
  • View 1zg5
Molmil generated image of 1zg5
NARL COMPLEXED TO NARG-89 PROMOTER PALINDROMIC TAIL-TO-TAIL DNA SITE
Descriptor:5'-D(*CP*GP*TP*AP*CP*CP*CP*CP*TP*AP*TP*AP*GP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/nitrite response regulator protein narL, SULFATE ION
Authors:Maris, A.E., Kaczor-Grzeskowiak, M., Ma, Z., Kopka, M.L., Gunsalus, R.P., Dickerson, R.E.
Deposit date:2005-04-20
Release date:2005-11-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Primary and Secondary Modes of DNA Recognition by the NarL Two-Component Response Regulator.
Biochemistry, 44, 2005
1A04
  • Download 1a04
  • View 1a04
Molmil generated image of 1a04
THE STRUCTURE OF THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL IN THE MONOCLINIC C2 CRYSTAL FORM
Descriptor:NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL
Authors:Baikalov, I., Schroder, I., Kaczor-Grzeskowiak, M., Cascio, D., Gunsalus, R.P., Dickerson, R.E.
Deposit date:1997-12-08
Release date:1998-03-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:NarL dimerization? Suggestive evidence from a new crystal form
Biochemistry, 37, 1998
158D
  • Download 158d
  • View 158d
Molmil generated image of 158d
CRYSTALLOGRAPHIC ANALYSIS OF C-C-A-A-G-C-T-T-G-G AND ITS IMPLICATIONS FOR BENDING IN B-DNA
Descriptor:DNA (5'-D(*CP*CP*AP*AP*GP*CP*TP*TP*GP*G)-3'), CALCIUM ION
Authors:Grzeskowiak, K., Goodsell, D.S., Kaczor-Grzeskowiak, M., Cascio, D., Dickerson, R.E.
Deposit date:1994-02-03
Release date:1994-05-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic analysis of C-C-A-A-G-C-T-T-G-G and its implications for bending in B-DNA.
Biochemistry, 32, 1993
167D
  • Download 167d
  • View 167d
Molmil generated image of 167d
THE CRYSTAL STRUCTURE OF C-C-A-T-T-A-A-T-G-G: IMPLICATIONS FOR BENDING OF B-DNA AT T-A STEPS
Descriptor:DNA (5'-D(*CP*CP*AP*TP*TP*AP*AP*TP*GP*G)-3')
Authors:Goodsell, D.S., Kaczor-Grzeskowiak, M., Dickerson, R.E.
Deposit date:1994-04-04
Release date:1994-08-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of C-C-A-T-T-A-A-T-G-G. Implications for bending of B-DNA at T-A steps.
J.Mol.Biol., 239, 1994
1D60
  • Download 1d60
  • View 1d60
Molmil generated image of 1d60
THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: TRIGONAL FORM
Descriptor:DNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3'), MAGNESIUM ION
Authors:Lipanov, A., Kopka, M.L., Kaczor-Grzeskowiak, M., Quintana, J., Dickerson, R.E.
Deposit date:1992-02-26
Release date:1993-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA.
Biochemistry, 32, 1993
1D61
  • Download 1d61
  • View 1d61
Molmil generated image of 1d61
THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: MONOCLINIC FORM
Descriptor:DNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3'), CACODYLATE ION, CALCIUM ION
Authors:Lipanov, A., Kopka, M.L., Kaczor-Grzeskowiak, M., Quintana, J., Dickerson, R.E.
Deposit date:1992-02-26
Release date:1993-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA.
Biochemistry, 32, 1993
1D62
  • Download 1d62
  • View 1d62
Molmil generated image of 1d62
THE STRUCTURE OF A /B-DNA$ DECAMER WITH AN I(SLASH)*A MISMATCH AND COMPARISON WITH THE G(SLASH)*A MISMATCH
Descriptor:5'-D(*CP*CP*AP*AP*IP*AP*TP*TP*GP*G)-3'
Authors:Lipanov, A., Kopka, M.L., Kaczor-Grzeskowiak, M., Dickerson, R.E.
Deposit date:1992-03-01
Release date:1993-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA.
Biochemistry, 32, 1993
1JE8
  • Download 1je8
  • View 1je8
Molmil generated image of 1je8
TWO-COMPONENT RESPONSE REGULATOR NARL/DNA COMPLEX: DNA BENDING FOUND IN A HIGH AFFINITY SITE
Descriptor:5'-D(*CP*GP*TP*AP*CP*CP*CP*AP*TP*TP*AP*AP*TP*GP*GP*GP*TP*AP*CP*G)-3', Nitrate/Nitrite Response Regulator Protein NARL, SULFATE ION
Authors:Maris, A.E., Sawaya, M.R., Kaczor-Grzeskowiak, M., Jarvis, M.R., Bearson, S.M.D., Kopka, M.L., Schroder, I., Gunsalus, R.P., Dickerson, R.E.
Deposit date:2001-06-15
Release date:2002-09-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Dimerization allows DNA target site recognition by the NarL response regulator.
Nat.Struct.Biol., 9, 2002
1RNL
  • Download 1rnl
  • View 1rnl
Molmil generated image of 1rnl
THE NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL FROM NARL
Descriptor:NITRATE/NITRITE RESPONSE REGULATOR PROTEIN NARL, PLATINUM (II) ION, GLYCEROL
Authors:Baikalov, I., Schroder, I., Kaczor-Grzeskowiak, M., Grzeskowiak, K., Gunsalus, R.P., Dickerson, R.E.
Deposit date:1996-04-17
Release date:1996-11-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the Escherichia coli response regulator NarL.
Biochemistry, 35, 1996
455D
  • Download 455d
  • View 455d
Molmil generated image of 455d
A6/A18 INTER-STRAND DITHIOBIS(PROPANE)-CROSSLINKED DODECAMER (CGCGAATTCGCG)2
Descriptor:DNA (5'-D(*CP*GP*CP*GP*AP*(SSP)AP*TP*TP*CP*GP*CP*G)-3'), MAGNESIUM ION, DITHIOBIS-(PROPANE)
Authors:Chiu, T.K., Kaczor-Grzeskowiak, M., Dickerson, R.E.
Deposit date:1999-03-04
Release date:1999-10-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Absence of minor groove monovalent cations in the crosslinked dodecamer C-G-C-G-A-A-T-T-C-G-C-G.
J.Mol.Biol., 292, 1999
3FIS
  • Download 3fis
  • View 3fis
Molmil generated image of 3fis
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
Descriptor:FACTOR FOR INVERSION STIMULATION (FIS)
Authors:Yuan, H.S., Finkel, S.E., Feng, J-A., Johnson, R.C., Dickerson, R.E.
Deposit date:1991-08-12
Release date:1993-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding.
Proc.Natl.Acad.Sci.USA, 88, 1991
4FIS
  • Download 4fis
  • View 4fis
Molmil generated image of 4fis
THE MOLECULAR STRUCTURE OF WILD-TYPE AND A MUTANT FIS PROTEIN: RELATIONSHIP BETWEEN MUTATIONAL CHANGES AND RECOMBINATIONAL ENHANCER FUNCTION OR DNA BINDING
Descriptor:FACTOR FOR INVERSION STIMULATION (FIS)
Authors:Yuan, H.S., Finkel, S.E., Feng, J.-A., Johnson, R.C., Dickerson, R.E.
Deposit date:1991-08-12
Release date:1993-10-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The molecular structure of wild-type and a mutant Fis protein: relationship between mutational changes and recombinational enhancer function or DNA binding.
Proc.Natl.Acad.Sci.USA, 88, 1991
1EN3
  • Download 1en3
  • View 1en3
Molmil generated image of 1en3
1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM
Descriptor:DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3'), MAGNESIUM ION
Authors:Chiu, T.K., Dickerson, R.E.
Deposit date:2000-03-20
Release date:2000-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.985 Å)
Cite:1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium.
J.Mol.Biol., 301, 2000
1EN8
  • Download 1en8
  • View 1en8
Molmil generated image of 1en8
1 A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM
Descriptor:DNA (5'-D(*CP*CP*AP*AP*CP*GP*TP*TP*GP*G)-3'), CALCIUM ION, ETHANOL
Authors:Chiu, T.K., Dickerson, R.E.
Deposit date:2000-03-20
Release date:2000-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.985 Å)
Cite:1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium.
J.Mol.Biol., 301, 2000
1EN9
  • Download 1en9
  • View 1en9
Molmil generated image of 1en9
1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.
Descriptor:DNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'), MAGNESIUM ION
Authors:Chiu, T.K., Dickerson, R.E.
Deposit date:2000-03-20
Release date:2000-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.985 Å)
Cite:1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium.
J.Mol.Biol., 301, 2000
1ENE
  • Download 1ene
  • View 1ene
Molmil generated image of 1ene
1A CRYSTAL STRUCTURES OF B-DNA REVEAL SEQUENCE-SPECIFIC BINDING AND GROOVE-SPECIFIC BENDING OF DNA BY MAGNESIUM AND CALCIUM.
Descriptor:DNA (5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'), CALCIUM ION, ETHANOL
Authors:Chiu, T.K., Dickerson, R.E.
Deposit date:2000-03-21
Release date:2000-09-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.985 Å)
Cite:1 A crystal structures of B-DNA reveal sequence-specific binding and groove-specific bending of DNA by magnesium and calcium.
J.Mol.Biol., 301, 2000