Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1RCN
DownloadVisualize
BU of 1rcn by Molmil
CRYSTAL STRUCTURE OF THE RIBONUCLEASE A D(APTPAPAPG) COMPLEX : DIRECT EVIDENCE FOR EXTENDED SUBSTRATE RECOGNITION
Descriptor: DNA (5'-D(*AP*TP*AP*A)-3'), PROTEIN (RIBONUCLEASE A (E.C.3.1.27.5))
Authors:Fontecilla-Camps, J.C, De Llorens, R, Le Du, M.H, Cuchillo, C.M.
Deposit date:1994-05-27
Release date:1994-09-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Crystal structure of ribonuclease A.d(ApTpApApG) complex. Direct evidence for extended substrate recognition.
J.Biol.Chem., 269, 1994
1PTX
DownloadVisualize
BU of 1ptx by Molmil
CRYSTAL STRUCTURE OF TOXIN II FROM THE SCORPION ANDROCTONUS AUSTRALIS HECTOR REFINED AT 1.3 ANGSTROMS RESOLUTION
Descriptor: SCORPION TOXIN II
Authors:Fontecilla-Camps, J.C, Housset, D.
Deposit date:1994-09-02
Release date:1995-01-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of toxin II from the scorpion Androctonus australis Hector refined at 1.3 A resolution.
J.Mol.Biol., 238, 1994
4URH
DownloadVisualize
BU of 4urh by Molmil
High-resolution structure of partially oxidized D. fructosovorans NiFe-hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-30
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.
J. Biol. Inorg. Chem., 20, 2015
7B0C
DownloadVisualize
BU of 7b0c by Molmil
[4Fe-4S]-NsrR complexed to 23-bp HmpA1 operator fragment
Descriptor: DNA (5'-D(P*AP*AP*CP*AP*CP*GP*AP*AP*TP*AP*TP*CP*AP*TP*CP*TP*AP*CP*CP*AP*AP*TP*T)-3'), DNA (5'-D(P*AP*AP*TP*TP*GP*GP*TP*AP*GP*AP*TP*GP*AP*TP*AP*TP*TP*CP*GP*TP*GP*TP*T)-3'), HTH-type transcriptional repressor NsrR, ...
Authors:Rohac, R, Fontecilla-Camps, J.C, Volbeda, A.
Deposit date:2020-11-19
Release date:2022-06-01
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural determinants of DNA recognition by the NO sensor NsrR and related Rrf2-type [FeS]-transcription factors.
Commun Biol, 5, 2022
8QTO
DownloadVisualize
BU of 8qto by Molmil
CRYSTAL STRUCTURE OF HOLO-L28H-FNR OF A. FISCHERI
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FNR type regulator, IRON/SULFUR CLUSTER
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2023-10-13
Release date:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Probing the Reactivity of [4Fe-4S] Fumarate and Nitrate Reduction (FNR) Regulator with O2 and NO: Increased O2 Resistance and Relative Specificity for NO of the [4Fe-4S] L28H FNR Cluster
Inorganics (Basel), 11, 2023
6Y42
DownloadVisualize
BU of 6y42 by Molmil
Crystal Structure of RsrR complexed to a 39 basepair DNA fragment of the rsrR promoter
Descriptor: DNA (39-MER), FE2/S2 (INORGANIC) CLUSTER, Rrf2 family transcriptional regulator
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2020-02-19
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:Electron and Proton Transfers Modulate DNA Binding by the Transcription Regulator RsrR.
J.Am.Chem.Soc., 142, 2020
6Y45
DownloadVisualize
BU of 6y45 by Molmil
Crystal Structure of the H33A variant of RsrR
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Rohac, R, Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2020-02-19
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Electron and Proton Transfers Modulate DNA Binding by the Transcription Regulator RsrR.
J.Am.Chem.Soc., 142, 2020
4UQP
DownloadVisualize
BU of 4uqp by Molmil
High-resolution structure of the D. fructosovorans NiFe-hydrogenase L122A mutant after exposure to air
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-24
Release date:2014-10-29
Last modified:2023-03-15
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 20, 2015
4UQL
DownloadVisualize
BU of 4uql by Molmil
High-resolution structure of a Ni-A Ni-Sox mixture of the D. fructosovorans NiFe-hydrogenase L122A mutant
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-24
Release date:2014-10-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.22 Å)
Cite:Crystallographic Studies of [Nife]-Hydrogenase Mutants: Towards Consensus Structures for the Elusive Unready Oxidized States.
J.Biol.Inorg.Chem., 20, 2015
6G94
DownloadVisualize
BU of 6g94 by Molmil
Structure of E. coli hydrogenase-1 C19G variant in complex with cytochrome b
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2018-04-10
Release date:2018-06-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structural, functional and computational studies of the O2-sensitive E. coli hydrogenase-1 C19G variant reveal an unusual [4Fe-4S] cluster.
Chem. Commun. (Camb.), 54, 2018
5CVR
DownloadVisualize
BU of 5cvr by Molmil
Crystal structure of FNR of A. fischeri in a partially degraded form
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, FE2/S2 (INORGANIC) CLUSTER, FNR type regulator
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2015-07-27
Release date:2015-12-16
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The crystal structure of the global anaerobic transcriptional regulator FNR explains its extremely fine-tuned monomer-dimer equilibrium.
Sci Adv, 1, 2015
6G74
DownloadVisualize
BU of 6g74 by Molmil
Structure of the Y21F variant of quinolinate synthase in complex with phthalate
Descriptor: IRON/SULFUR CLUSTER, PHTHALIC ACID, Quinolinate synthase A
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2018-04-04
Release date:2018-04-25
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic Trapping of Reaction Intermediates in Quinolinic Acid Synthesis by NadA.
ACS Chem. Biol., 13, 2018
4UPV
DownloadVisualize
BU of 4upv by Molmil
Low X-ray dose structure of a Ni-A Ni-Sox mixture of the D. fructosovorans NiFe-hydrogenase L122A mutant
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, CHLORIDE ION, FE3-S4 CLUSTER, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-18
Release date:2014-10-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.
J. Biol. Inorg. Chem., 20, 2015
4UPE
DownloadVisualize
BU of 4upe by Molmil
Structure of the unready Ni-A state of the S499C mutant of D. fructosovorans NiFe-hydrogenase
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CARBONMONOXIDE-(DICYANO) IRON, ...
Authors:Volbeda, A, Martin, L, Barbier, E, Gutierrez-Sanz, O, DeLacey, A.L, Liebgott, P.P, Dementin, S, Rousset, M, Fontecilla-Camps, J.C.
Deposit date:2014-06-16
Release date:2014-10-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic studies of [NiFe]-hydrogenase mutants: towards consensus structures for the elusive unready oxidized states.
J. Biol. Inorg. Chem., 20, 2015
2UZA
DownloadVisualize
BU of 2uza by Molmil
CRYSTAL STRUCTURE OF THE FREE RADICAL INTERMEDIATE OF PYRUVATE:FERREDOXIN OXIDOREDUCTASE FROM DESULFOVIBRIO AFRICANUS
Descriptor: 2-ACETYL-THIAMINE DIPHOSPHATE, CALCIUM ION, CARBON DIOXIDE, ...
Authors:Chabriere, E, Cavazza, C, Contreras-Martel, C, Fontecilla-Camps, J.C.
Deposit date:2007-04-27
Release date:2008-05-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Flexibility of thiamine diphosphate revealed by kinetic crystallographic studies of the reaction of pyruvate-ferredoxin oxidoreductase with pyruvate.
Structure, 14, 2006
6HSM
DownloadVisualize
BU of 6hsm by Molmil
Structure of partially reduced RsrR in space group P2(1)2(1)2(1)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2018-10-01
Release date:2019-01-30
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of the Transcription Regulator RsrR Reveals a [2Fe-2S] Cluster Coordinated by Cys, Glu, and His Residues.
J. Am. Chem. Soc., 141, 2019
6HSE
DownloadVisualize
BU of 6hse by Molmil
Structure of dithionite-reduced RsrR in spacegroup P2(1)
Descriptor: FE2/S2 (INORGANIC) CLUSTER, GLYCEROL, Rrf2 family transcriptional regulator, ...
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2018-10-01
Release date:2019-01-30
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of the Transcription Regulator RsrR Reveals a [2Fe-2S] Cluster Coordinated by Cys, Glu, and His Residues.
J. Am. Chem. Soc., 141, 2019
6HSD
DownloadVisualize
BU of 6hsd by Molmil
Crystal structure of the oxidized form of the transcription regulator RsrR
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Volbeda, A, Fontecilla-Camps, J.C.
Deposit date:2018-09-30
Release date:2019-01-30
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Transcription Regulator RsrR Reveals a [2Fe-2S] Cluster Coordinated by Cys, Glu, and His Residues.
J. Am. Chem. Soc., 141, 2019
3H3X
DownloadVisualize
BU of 3h3x by Molmil
Structure of the V74M large subunit mutant of NI-FE hydrogenase in an oxidized state
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martinez, N, Martin, L, Fontecilla-Camps, J.C.
Deposit date:2009-04-17
Release date:2009-07-21
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Introduction of methionines in the gas channel makes [NiFe] hydrogenase aero-tolerant
J.Am.Chem.Soc., 131, 2009
4UE2
DownloadVisualize
BU of 4ue2 by Molmil
Structure of air-treated anaerobically purified D. fructosovorans NiFe-hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-15
Release date:2015-03-25
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:[Nife]-Hydrogenases Revisited: Nickel-Carboxamido Bond Formation in a Variant with Accrued O2-Tolerance and a Tentative Re-Interpretation of Ni-Si States.
Metallomics, 7, 2015
4UD2
DownloadVisualize
BU of 4ud2 by Molmil
Structure of anaerobically purified D. fructosovorans NiFe- hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-05
Release date:2015-03-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:[Nife]-Hydrogenases Revisited: Nickel-Carboxamido Bond Formation in a Variant with Accrued O2-Tolerance and a Tentative Re-Interpretation of Ni-Si States.
Metallomics, 7, 2015
4UD6
DownloadVisualize
BU of 4ud6 by Molmil
Structure of methylviologen-treated anaerobically purified D. fructosovorans NiFe-hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-08
Release date:2015-03-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:[NiFe]-hydrogenases revisited: nickel-carboxamido bond formation in a variant with accrued O2-tolerance and a tentative re-interpretation of Ni-SI states.
Metallomics, 7, 2015
4UEQ
DownloadVisualize
BU of 4ueq by Molmil
Structure of the V74C large subunit mutant of D. fructosovorans NiFe- hydrogenase
Descriptor: CALCIUM ION, CARBONATE ION, CARBONMONOXIDE-(DICYANO) IRON, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-18
Release date:2015-03-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:[NiFe]-hydrogenases revisited: nickel-carboxamido bond formation in a variant with accrued O2-tolerance and a tentative re-interpretation of Ni-SI states.
Metallomics, 7, 2015
4UE6
DownloadVisualize
BU of 4ue6 by Molmil
Structure of methylene blue-treated anaerobically purified D. fructosovorans NiFe-hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-16
Release date:2015-03-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:[Nife]-Hydrogenases Revisited: Nickel-Carboxamido Bond Formation in a Variant with Accrued O2-Tolerance and a Tentative Re-Interpretation of Ni-Si States.
Metallomics, 7, 2015
4UEW
DownloadVisualize
BU of 4uew by Molmil
Structure of H2-treated anaerobically purified D. fructosovorans NiFe- hydrogenase
Descriptor: CARBONMONOXIDE-(DICYANO) IRON, FE3-S4 CLUSTER, GLYCEROL, ...
Authors:Volbeda, A, Martin, L, Liebgott, P.-P, Fontecilla-Camps, J.C.
Deposit date:2014-12-20
Release date:2015-03-25
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:[NiFe]-hydrogenases revisited: nickel-carboxamido bond formation in a variant with accrued O2-tolerance and a tentative re-interpretation of Ni-SI states.
Metallomics, 7, 2015

238895

PDB entries from 2025-07-16

PDB statisticsPDBj update infoContact PDBjnumon