Author results

2G32
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CRYSTAL STRUCTURE OF AN RNA RACEMATE
Descriptor:RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), CALCIUM ION, ...
Authors:Rypniewski, W., Vallazza, M., Perbandt, M., Klussmann, S., Betzel, C., Erdmann, V.A.
Deposit date:2006-02-17
Release date:2006-05-30
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GPM
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CRYSTAL STRUCTURE OF AN RNA RACEMATE
Descriptor:RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), CALCIUM ION
Authors:Rypniewski, W., Vallazza, M., Perbandt, M., Klussmann, S., Betzel, C., Erdmann, V.A.
Deposit date:2006-04-18
Release date:2006-06-27
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ4
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CRYSTAL STRUCTURE OF AN RNA RACEMATE
Descriptor:RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), CALCIUM ION, ...
Authors:Rypniewski, W., Vallazza, M., Perbandt, M., Klussmann, S., Betzel, C., Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ5
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CRYSTAL STRUCTURE OF AN RNA RACEMATE
Descriptor:RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), CALCIUM ION, ...
Authors:Rypniewski, W., Vallazza, M., Perbandt, M., Klussmann, S., Betzel, C., Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ6
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CRYSTAL STRUCTURE OF AN RNA RACEMATE
Descriptor:RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), CALCIUM ION, ...
Authors:Rypniewski, W., Vallazza, M., Perbandt, M., Klussmann, S., Betzel, C., Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
2GQ7
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CRYSTAL STRUCTURE OF AN RNA RACEMATE
Descriptor:RNA (5'-R(*(0C)P*(0U)P*(0G)P*(0G)P*(0G)P*(0C)P*(0G)P*(0G))-3'), RNA (5'-R(*(0C)P*(0C)P*(0G)P*(0C)P*(0C)P*(0U)P*(0G)P*(0G))-3'), CALCIUM ION, ...
Authors:Rypniewski, W., Vallazza, M., Perbandt, M., Klussmann, S., Betzel, C., Erdmann, V.A.
Deposit date:2006-04-20
Release date:2006-06-27
Last modified:2012-03-28
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The first crystal structure of an RNA racemate.
Acta Crystallogr.,Sect.D, 62, 2006
3CZW
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X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX
Descriptor:RNA (5'-R(*G*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), SULFATE ION
Authors:Rypniewski, W., Adamiak, D.A., Milecki, J., Adamiak, R.W.
Deposit date:2008-04-30
Release date:2008-09-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex.
Rna, 14, 2008
3D0M
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X-RAY STRUCTURES OF THE (GUGGUCUGAUGAGGCC) RNA DUPLEX
Descriptor:RNA (5'-R(*GP*UP*GP*GP*UP*CP*UP*GP*AP*UP*GP*AP*GP*GP*CP*C)-3'), SULFATE ION
Authors:Rypniewski, W., Adamiak, D.A., Milecki, J., Adamiak, R.W.
Deposit date:2008-05-02
Release date:2008-09-09
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2 Å)
Cite:Noncanonical G(syn)-G(anti) base pairs stabilized by sulphate anions in two X-ray structures of the (GUGGUCUGAUGAGGCC) RNA duplex.
Rna, 14, 2008
4XW0
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CRYSTAL STRUCTURE OF (GCCU(G-LNA)CCUGC)2 DUPLEX
Descriptor:RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*GP*C)-3'), SULFATE ION
Authors:Kiliszek, A., Banaszak, K., Rypniewski, W.
Deposit date:2015-01-28
Release date:2016-01-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
4XW1
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CRYSTAL STRUCTURE OF (GCCU(G-LNA)CCUG)2 DUPLEX
Descriptor:RNA (5'-R(*GP*CP*CP*UP*(LCG)P*CP*CP*UP*G)-3')
Authors:Kiliszek, A., Banaszak, K., Rypniewski, W.
Deposit date:2015-01-28
Release date:2016-01-13
Method:X-RAY DIFFRACTION (2.302 Å)
Cite:Watson-Crick-like pairs in CCUG repeats: evidence for tautomeric shifts or protonation.
Rna, 22, 2016
4E5O
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CRYSTAL STRUCTURE OF MOUSE THYMIDYLATE SYNTHASE IN COMPLEX WITH DUMP
Descriptor:Thymidylate synthase, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 1,4-BUTANEDIOL
Authors:Dowiercial, A., Jarmula, A., Rypniewski, W., Sokolowska, M., Fraczyk, T., Ciesla, J., Rode, W.
Deposit date:2012-03-14
Release date:2012-04-18
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Mouse thymidylate synthase does not show the inactive conformation, observed for the human enzyme
Struct Chem, 2016
2PUT
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THE CRYSTAL STRUCTURE OF ISOMERASE DOMAIN OF GLUCOSAMINE-6-PHOSPHATE SYNTHASE FROM CANDIDA ALBICANS
Descriptor:isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing), ACETATE ION, SODIUM ION, ...
Authors:Raczynska, J., Olchowy, J., Milewski, S., Rypniewski, W.
Deposit date:2007-05-09
Release date:2007-09-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
2PUV
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THE CRYSTAL STRUCTURE OF ISOMERASE DOMAIN OF GLUCOSAMINE-6-PHOSPHATE SYNTHASE FROM CANDIDA ALBICANS
Descriptor:isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing), ACETATE ION, SODIUM ION, ...
Authors:Raczynska, J., Olchowy, J., Milewski, S., Rypniewski, W.
Deposit date:2007-05-09
Release date:2007-09-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
2PUW
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THE CRYSTAL STRUCTURE OF ISOMERASE DOMAIN OF GLUCOSAMINE-6-PHOSPHATE SYNTHASE FROM CANDIDA ALBICANS
Descriptor:isomerase domain of glutamine-fructose-6-phosphate transaminase (isomerizing), BETA-D-GLUCOSE-6-PHOSPHATE, CHLORIDE ION
Authors:Raczynska, J., Olchowy, J., Milewski, S., Rypniewski, W.
Deposit date:2007-05-09
Release date:2007-09-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.151 Å)
Cite:The Crystal and Solution Studies of Glucosamine-6-phosphate Synthase from Candida albicans
J.Mol.Biol., 372, 2007
4MB3
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CRYSTAL STRUCTURE OF E153Q MUTANT OF COLD-ADAPTED CHITINASE FROM MORITELLA MARINA
Descriptor:Chitinase 60, SODIUM ION, GLYCINE, ...
Authors:Malecki, P.H., Vorgias, C.E., Rypniewski, W.
Deposit date:2013-08-19
Release date:2014-03-19
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
4MB4
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CRYSTAL STRUCTURE OF E153Q MUTANT OF COLD-ADAPTED CHITINASE FROM MORITELLA COMPLEX WITH NAG4
Descriptor:Chitinase 60, GLYCEROL, SODIUM ION, ...
Authors:Malecki, P.H., Vorgias, C.E., Rypniewski, W.
Deposit date:2013-08-19
Release date:2014-03-19
Method:X-RAY DIFFRACTION (1.481 Å)
Cite:Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
4MB5
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CRYSTAL STRUCTURE OF E153Q MUTANT OF COLD-ADAPTED CHITINASE FROM MORITELLA COMPLEX WITH NAG5
Descriptor:Chitinase 60, SODIUM ION, GLYCEROL, ...
Authors:Malecki, P.H., Vorgias, C.E., Rypniewski, W.
Deposit date:2013-08-19
Release date:2014-03-19
Method:X-RAY DIFFRACTION (1.639 Å)
Cite:Crystal structures of substrate-bound chitinase from the psychrophilic bacterium Moritella marina and its structure in solution
Acta Crystallogr.,Sect.D, 70, 2014
1LNL
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STRUCTURE OF DEOXYGENATED HEMOCYANIN FROM RAPANA THOMASIANA
Descriptor:hemocyanin, N-ACETYL-D-GLUCOSAMINE, COPPER (II) ION
Authors:Perbandt, M., Guthoehrlein, E.W., Rypniewski, W., Idakieva, K., Stoeva, S., Voelter, W., Genov, N., Betzel, C.
Deposit date:2002-05-03
Release date:2003-06-03
Last modified:2018-07-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:The structure of a functional unit from the wall of a gastropod hemocyanin offers a possible mechanism for cooperativity
Biochemistry, 42, 2003
1M2T
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MISTLETOE LECTIN I FROM VISCUM ALBUM IN COMPLEX WITH ADENINE MONOPHOSPHATE. CRYSTAL STRUCTURE AT 1.9 A RESOLUTION
Descriptor:mistletoe lectin I A chain, mistletoe lectin I B chain, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Krauspenhaar, R., Rypniewski, W., Kalkura, N., Moore, K., DeLucas, L., Stoeva, S., Mikhailov, A., Voelter, W., Betzel, C.
Deposit date:2002-06-25
Release date:2003-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystallisation under microgravity of mistletoe lectin I from Viscum album with adenine monophosphate and the crystal structure at 1.9 A resolution.
Acta Crystallogr.,Sect.D, 58, 2002
2R9K
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CRYSTAL STRUCTURE OF MISTELTOE LECTIN I IN COMPLEX WITH PHLORETAMIDE
Descriptor:Beta-galactoside-specific lectin 1, N-ACETYL-D-GLUCOSAMINE, SULFATE ION, ...
Authors:Meyer, A., Rypniewski, W., Celewicz, L., Erdmann, V.A., Voelter, W., Betzel, C.
Deposit date:2007-09-13
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The mistletoe lectin I--phloretamide structure reveals a new function of plant lectins.
Biochem.Biophys.Res.Commun., 364, 2007
3D7W
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MISTLETOE LECTIN I IN COMPLEX WITH ZEATIN
Descriptor:Beta-galactoside-specific lectin 1, N-ACETYL-D-GLUCOSAMINE, SULFATE ION, ...
Authors:Meyer, A., Rypniewski, W., Szymanski, M., Voelter, W., Barciszewski, J., Betzel, C.
Deposit date:2008-05-22
Release date:2008-06-17
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure of mistletoe lectin I from Viscum album in complex with the phytohormone zeatin
Biochim.Biophys.Acta, 1784, 2008
4EZ8
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CRYSTAL STRUCTURE OF MOUSE THYMIDYLATE SYTHASE IN TERNARY COMPLEX WITH N(4)-HYDROXY-2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE AND THE COFACTOR PRODUCT, DIHYDROFOLATE
Descriptor:Thymidylate synthase, 2'-deoxy-N-hydroxycytidine 5'-(dihydrogen phosphate), DIHYDROFOLIC ACID, ...
Authors:Dowiercial, A., Jarmula, A., Rypniewski, W., Wilk, P., Kierdaszuk, B., Banaszak, K., Gorecka, K., Rode, W.
Deposit date:2012-05-02
Release date:2013-05-08
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Crystal structures of complexes of mouse thymidylate synthase crystallized with N4-OH-dCMP alone or in the presence of N5,10-methylenetetrahydrofolate
Pteridines, 2013
4IQB
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HIGH RESOLUTION CRYSTAL STRUCTURE OF C.ELEGANS THYMIDYLATE SYNTHASE
Descriptor:Thymidylate synthase, SULFATE ION
Authors:Wilk, P., Dowiercial, A., Banaszak, K., Jarmula, A., Rypniewski, W., Rode, W.
Deposit date:2013-01-11
Release date:2014-01-22
Last modified:2018-11-28
Method:X-RAY DIFFRACTION (1.13 Å)
Cite:Crystal structures of nematode (parasitic T. spiralis and free living C. elegans), compared to mammalian, thymidylate synthases (TS). Molecular docking and molecular dynamics simulations in search for nematode-specific inhibitors of TS.
J. Mol. Graph. Model., 77, 2017
4IQQ
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CRYSTAL STRUCTURE OF C.ELEGANS THYMIDYLATE SYNTHASE IN COMPLEX WITH DUMP AND TOMUDEX
Descriptor:Thymidylate synthase, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, TOMUDEX
Authors:Wilk, P., Dowiercial, A., Banaszak, K., Jarmula, A., Rypniewski, W., Rode, W.
Deposit date:2013-01-13
Release date:2014-01-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP and Tomudex
To be Published
4IRR
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CRYSTAL STRUCTURE OF C.ELEGANS THYMIDYLATE SYNTHASE IN COMPLEX WITH DUMP
Descriptor:Thymidylate synthase, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, 2,3-DIHYDROXY-1,4-DITHIOBUTANE
Authors:Wilk, P., Dowiercial, A., Banaszak, K., Jarmula, A., Rypniewski, W., Rode, W.
Deposit date:2013-01-15
Release date:2014-01-29
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal Structure of C.elegans Thymidylate Synthase in Complex with dUMP
To be Published