Author results

1BTC
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THREE-DIMENSIONAL STRUCTURE OF SOYBEAN BETA-AMYLASE DETERMINED AT 3.0 ANGSTROMS RESOLUTION: PRELIMINARY CHAIN TRACING OF THE COMPLEX WITH ALPHA-CYCLODEXTRIN
Descriptor:BETA-AMYLASE, ALPHA-D-GLUCOSE, SULFATE ION, ...
Authors:Mikami, B., Hehre, E.J., Sato, M., Katsube, Y., Hirose, M., Morita, Y., Sacchettini, J.C.
Deposit date:1993-02-18
Release date:1993-10-31
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0-A resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin.
Biochemistry, 32, 1993
1BYA
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CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS
Descriptor:BETA-AMYLASE, SULFATE ION
Authors:Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C.
Deposit date:1994-01-25
Release date:1994-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
1BYB
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CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS
Descriptor:BETA-AMYLASE, ALPHA-D-GLUCOSE, SULFATE ION
Authors:Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C.
Deposit date:1994-01-25
Release date:1994-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
1BYC
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CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS
Descriptor:BETA-AMYLASE, ALPHA-D-GLUCOSE, BETA-D-GLUCOSE, ...
Authors:Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C.
Deposit date:1994-01-25
Release date:1994-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
1BYD
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CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS
Descriptor:BETA-AMYLASE, 2'-DEOXYMALTOSE, SULFATE ION
Authors:Mikami, B., Degano, M., Hehre, E.J., Sacchettini, J.C.
Deposit date:1994-01-25
Release date:1994-07-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of soybean beta-amylase reacted with beta-maltose and maltal: active site components and their apparent roles in catalysis.
Biochemistry, 33, 1994
1B1Y
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SEVENFOLD MUTANT OF BARLEY BETA-AMYLASE
Descriptor:PROTEIN (BETA-AMYLASE), ALPHA-D-GLUCOSE, BETA-D-GLUCOSE
Authors:Mikami, B., Yoon, H.J., Yoshigi, N.
Deposit date:1998-11-25
Release date:1998-12-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The crystal structure of the sevenfold mutant of barley beta-amylase with increased thermostability at 2.5 A resolution.
J.Mol.Biol., 285, 1999
1B90
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BACILLUS CEREUS BETA-AMYLASE APO FORM
Descriptor:PROTEIN (BETA-AMYLASE), ACETATE ION, SULFATE ION, ...
Authors:Mikami, B., Adachi, M., Kage, T., Sarikaya, E., Nanmori, T., Shinke, R., Utsumi, S.
Deposit date:1999-03-06
Release date:1999-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of raw starch-digesting Bacillus cereus beta-amylase complexed with maltose.
Biochemistry, 38, 1999
1B9Z
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BACILLUS CEREUS BETA-AMYLASE COMPLEXED WITH MALTOSE
Descriptor:PROTEIN (BETA-AMYLASE), MALTOSE, ACETATE ION, ...
Authors:Mikami, B., Adachi, M., Kage, T., Sarikaya, E., Nanmori, T., Shinke, R., Utsumi, S.
Deposit date:1999-03-06
Release date:1999-03-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of raw starch-digesting Bacillus cereus beta-amylase complexed with maltose.
Biochemistry, 38, 1999
1C7G
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TYROSINE PHENOL-LYASE FROM ERWINIA HERBICOLA
Descriptor:TYROSINE PHENOL-LYASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Mikami, B., Yamamoto, Y., Katayama, T., Suzuki, H.
Deposit date:2000-02-18
Release date:2003-12-09
Last modified:2018-04-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of Tyrosine Phenol-Lyase from Erwinia Herbicola
To be Published
2FGZ
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CRYSTAL STRUCTURE ANALYSIS OF APO PULLULANASE FROM KLEBSIELLA PNEUMONIAE
Descriptor:pullulanase, CALCIUM ION
Authors:Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
2FH6
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CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH GLUCOSE
Descriptor:pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION
Authors:Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
2FH8
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CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH ISOMALTOSE
Descriptor:pullulanase, ALPHA-D-GLUCOSE, BETA-D-GLUCOSE, ...
Authors:Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
2FHB
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CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH MALTOSE
Descriptor:pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION
Authors:Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
2FHC
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CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH MALTOTRIOSE
Descriptor:pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION
Authors:Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
2FHF
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CRYSTAL STRUCTURE ANALYSIS OF KLEBSIELLA PNEUMONIAE PULLULANASE COMPLEXED WITH MALTOTETRAOSE
Descriptor:pullulanase, ALPHA-D-GLUCOSE, CALCIUM ION
Authors:Mikami, B., Iwamoto, H., Katsuya, Y., Yoon, H.-J., Demirkan-Sarikaya, E., Malle, D.
Deposit date:2005-12-23
Release date:2006-06-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of pullulanase: evidence for parallel binding of oligosaccharides in the active site
J.Mol.Biol., 359, 2006
4E1Y
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ALGINATE LYASE A1-III H192A APO FORM
Descriptor:Alginate lyase
Authors:Mikami, B., Ban, M., Suzuki, S., Yoon, H.-J., Miyake, O., Yamasaki, M., Ogura, K., Maruyama, Y., Hashimoto, W., Murata, K.
Deposit date:2012-03-07
Release date:2012-04-11
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
4F10
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ALGINATE LYASE A1-III H192A COMPLEXED WITH TETRASACCHARIDE
Descriptor:Alginate lyase, 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid, ALPHA-L-GULURONATE, ...
Authors:Mikami, B., Ban, M., Suzuki, S., Yoon, H.-J., Miyake, O., Yamasaki, M., Ogura, K., Maruyama, Y., Hashimoto, W., Murata, K.
Deposit date:2012-05-05
Release date:2012-06-27
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
4F13
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ALGINATE LYASE A1-III Y246F COMPLEXED WITH TETRASACCHARIDE
Descriptor:Alginate lyase, 4-deoxy-alpha-L-erythro-hex-4-enopyranuronic acid, beta-D-mannuronic acid
Authors:Mikami, B., Ban, M., Suzuki, S., Yoon, H.-J., Miyake, O., Yamasaki, M., Ogura, K., Maruyama, Y., Hashimoto, W., Murata, K.
Deposit date:2012-05-06
Release date:2012-06-27
Last modified:2012-09-26
Method:X-RAY DIFFRACTION (2.208 Å)
Cite:Induced-fit motion of a lid loop involved in catalysis in alginate lyase A1-III
Acta Crystallogr.,Sect.D, 68, 2012
5EEO
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SOYBEAN LIPOXYGENASE(L1)-T756R
Descriptor:Seed linoleate 13S-lipoxygenase-1, FE (II) ION
Authors:Mikami, B., Nagaya, T., Hioki, Y.
Deposit date:2015-10-23
Release date:2015-11-25
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structural basis for specificity in lipoxygenase catalysis
To Be Published
2E8Y
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CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTILIS STR. 168
Descriptor:AmyX protein, CALCIUM ION, ACETATE ION, ...
Authors:Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y.
Deposit date:2007-01-24
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of pullulanase type I from Bacillus subtilis str. 168 in complex with maltose and alpha-cyclodextrin
To be Published
2E8Z
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CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTILIS STR. 168 COMPLEXED WITH ALPHA-CYCLODEXTRIN
Descriptor:AmyX protein, ALPHA-D-GLUCOSE, CALCIUM ION, ...
Authors:Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y.
Deposit date:2007-01-24
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of pullulanase type I from Bacillus subtilis str. 168 in complex with maltose and alpha-cyclodextrin
To be Published
2E9B
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CRYSTAL STRUCTURE OF PULLULANASE TYPE I FROM BACILLUS SUBTILIS STR. 168 COMPLEXED WITH MALTOSE
Descriptor:AmyX protein, ALPHA-D-GLUCOSE, CALCIUM ION, ...
Authors:Mikami, B., Malle, D., Utsumi, S., Iwamoto, H., Katsuya, Y.
Deposit date:2007-01-24
Release date:2008-02-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of pullulanase type I from Bacillus subtilis str. 168 in complex with maltose and alpha-cyclodextrin
To be Published
2F08
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CRYSTAL STRUCTURE OF A MAJOR HOUSE DUST MITE ALLERGEN, DERF 2
Descriptor:mite allergen Der f II, O-ACETALDEHYDYL-HEXAETHYLENE GLYCOL
Authors:Mikami, B., Tanaka, Y., Minato, N., Suzuki, M., Korematsu, S.
Deposit date:2005-11-12
Release date:2005-11-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure and some properties of a major house dust mite allergen, Derf 2
Biochem.Biophys.Res.Commun., 339, 2006
5Y6Q
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CRYSTAL STRUCTURE OF AN ALDEHYDE OXIDASE FROM METHYLOBACILLUS SP. KY4400
Descriptor:Aldehyde oxidase small subunit, Aldehyde oxidase medium subunit, Aldehyde oxidase large subunit, ...
Authors:Mikami, B., Uchida, H.
Deposit date:2017-08-13
Release date:2018-01-24
Last modified:2018-04-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an aldehyde oxidase from Methylobacillus sp. KY4400.
J. Biochem., 163, 2018
1BFN
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BETA-AMYLASE/BETA-CYCLODEXTRIN COMPLEX
Descriptor:BETA-AMYLASE, ALPHA-D-GLUCOSE, SULFATE ION
Authors:Adachi, M., Mikami, B., Katsube, T., Utsumi, S.
Deposit date:1998-05-22
Release date:1998-10-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Crystal structure of recombinant soybean beta-amylase complexed with beta-cyclodextrin.
J.Biol.Chem., 273, 1998