Author results

1UFY
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CRYSTAL ANALYSIS OF CHORISMATE MUTASE FROM THERMUS THERMOPHILUS
Descriptor:Chorismate mutase, CHLORIDE ION, MALONATE ION, ...
Authors:Inagaki, E., Miyano, M., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-11
Release date:2003-07-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:The Crystal Structure of Chorismate Mutase from Thermus Thermophilus
To be Published
1UG6
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STRUCTURE OF BETA-GLUCOSIDASE AT ATOMIC RESOLUTION FROM THERMUS THERMOPHILUS HB8
Descriptor:beta-glycosidase, GLYCEROL
Authors:Lokanath, N.K., Shiromizu, I., Miyano, M., Yokoyama, S., Kuramitsu, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-06-12
Release date:2003-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (0.99 Å)
Cite:Structure of Beta-Glucosidase at Atomic Resolution from Thermus Thermophilus Hb8
To be Published
1OI7
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THE CRYSTAL STRUCTURE OF SUCCINYL-COA SYNTHETASE ALPHA SUBUNIT FROM THERMUS THERMOPHILUS
Descriptor:SUCCINYL-COA SYNTHETASE ALPHA CHAIN
Authors:Takahashi, H., Tokunaga, Y., Kuroishi, C., Babayeva, N., Kuramitsu, S., Yokoyama, S., Miyano, M., Tahirov, T.H.
Deposit date:2003-06-10
Release date:2003-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:The Crystal Structure of Succinyl-Coa Synthetase from Thermus Thermophilus
To be Published
1ULR
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CRYSTAL STRUCTURE OF TT0497 FROM THERMUS THERMOPHILUS HB8
Descriptor:putative acylphosphatase
Authors:Ago, H., Hamada, K., Sugahara, M., Kuroishi, C., Kuramitsu, S., Yokoyama, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-09-16
Release date:2004-11-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal structure of tt0497 from Thermus thermophilus HB8
To be Published
1WCW
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CRYSTAL STRUCTURE OF UROPORPHYRINOGEN III SYNTHASE FROM AN EXTREMELY THERMOPHILIC BACTERIUM THERMUS THERMOPHILUS HB8 (WILD TYPE, NATIVE, FORM-1 CRYSTAL)
Descriptor:Uroporphyrinogen III synthase, GLYCEROL
Authors:Mizohata, E., Matsuura, T., Sakai, H., Murayama, K., Terada, T., Shirouzu, M., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-05-06
Release date:2005-05-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of Uroporphyrinogen III Synthase from Thermus thermophilus HB8
To be Published
2EHP
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CRYSTAL STRUCTURE OF A PUTATIVE PROTEIN (AQ1627) FROM AQUIFEX AEOLICUS
Descriptor:aq_1627 protein
Authors:Kumarevel, T.S., Karthe, P., Nakano, N., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-07
Release date:2007-09-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Crystal Structure of a Putative protein (AQ1627) from Aquifex aeolicus
To be Published
1UJP
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CRYSTAL STRUCTURE OF TRYPTOPHAN SYNTHASE A-SUBUNIT FROM THERMUS THERMOPHILUS HB8
Descriptor:Tryptophan synthase alpha chain, CITRIC ACID
Authors:Asada, Y., Yokoyama, S., Kuramitsu, S., Miyano, M., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-08-08
Release date:2003-08-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Stabilization mechanism of the tryptophan synthase alpha-subunit from Thermus thermophilus HB8: X-ray crystallographic analysis and calorimetry.
J.Biochem.(Tokyo), 138, 2005
3P0B
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THERMUS THERMOPHILUS FAMILY GH57 BRANCHING ENZYME: CRYSTAL STRUCTURE, MECHANISM OF ACTION AND PRODUCTS FORMED
Descriptor:TT1467 protein, GLYCEROL
Authors:Pijning, T., Dijkstra, B.W.
Deposit date:2010-09-28
Release date:2010-10-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Thermus thermophilus GLYCOSYL HYDROLASE FAMILY 57 branching enzyme: crystal structure, mechanism of action and products formed
To be Published
3B0X
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K263A MUTANT OF POLX FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH CA-DGTP
Descriptor:DNA polymerase beta family (X family), ZINC ION, CALCIUM ION, ...
Authors:Nakane, S., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.36 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
1UAY
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CRYSTAL STRUCTURE OF TYPE II 3-HYDROXYACYL-COA DEHYDROGENASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Type II 3-hydroxyacyl-CoA dehydrogenase, ADENOSINE
Authors:Kunishima, N., Asada, Y., Yokoyama, S., Kuramitsu, S., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-03-25
Release date:2003-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of Type II 3-Hydroxyacyl-CoA Dehydrogenase from Thermus thermophilus HB8
To be Published
1UB3
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CRYSTAL STRUCTURE OF TETRAMERIC STRUCTURE OF ALDOLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Aldolase protein, 1-HYDROXY-PENTANE-3,4-DIOL-5-PHOSPHATE
Authors:Lokanath, N.K., Miyano, M., Yokoyama, S., Kuramitsu, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-03-28
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1V37
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CRYSTAL STRUCTURE OF PHOSPHOGLYCERATE MUTASE FROM THERMUS THERMOPHILUS HB8
Descriptor:phosphoglycerate mutase, GLYCEROL
Authors:Sugahara, M., Yokoyama, S., Kuramitsu, S., Miyano, M., Iizuka, T., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-10-29
Release date:2004-12-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of phosphoglycerate mutase from Thermus thermophilus HB8
To be Published
3AU2
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DNA POLYMERASE X FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH CA-DGTP
Descriptor:DNA polymerase beta family (X family), 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ...
Authors:Nakane, S., Ishikawa, H., Wakamatsu, T., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-01-28
Release date:2012-01-25
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
1WLU
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CRYSTAL STRUCTURE OF TT0310 PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:phenylacetic acid degradation protein PaaI, CHLORIDE ION, GLYCEROL
Authors:Kunishima, N., Sugahara, M., Miyano, M., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-06-29
Release date:2005-07-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:A Novel Induced-fit Reaction Mechanism of Asymmetric Hot Dog Thioesterase PaaI
J.Mol.Biol., 352, 2005
1X54
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CRYSTAL STRUCTURE OF ASPARAGINYL-TRNA SYNTHETASE FROM PYROCOCCUS HORIKOSHII COMPLEXED WITH ASPARAGINYL-ADENYLATE
Descriptor:Asparaginyl-tRNA synthetase, MAGNESIUM ION, 4-AMINO-1,4-DIOXOBUTAN-2-AMINIUM ADENOSINE-5'-MONOPHOSPHATE, ...
Authors:Iwasaki, W., Sekine, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2005-05-15
Release date:2006-05-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural Basis of the Water-assisted Asparagine Recognition by Asparaginyl-tRNA Synthetase.
J.Mol.Biol., 360, 2006
3B0Y
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K263D MUTANT OF POLX FROM THERMUS THERMOPHILUS HB8 COMPLEXED WITH CA-DGTP
Descriptor:DNA polymerase beta family (X family), 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ZINC ION, ...
Authors:Nakane, S., Nakagawa, N., Masui, R., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2011-06-17
Release date:2012-05-02
Last modified:2012-06-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The structural basis of the kinetic mechanism of a gap-filling X-family DNA polymerase that binds Mg(2+)-dNTP before binding to DNA.
J.Mol.Biol., 417, 2012
1IOM
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CRYSTAL STRUCTURE OF CITRATE SYNTHASE FROM THERMUS THERMOPHILUS HB8
Descriptor:CITRATE SYNTHASE, SULFATE ION, CARBONATE ION, ...
Authors:Kanamori, E., Kouyama, T., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-03-19
Release date:2003-07-29
Last modified:2015-11-04
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8
BIOPHYS PHYSICOBIO., 12, 2015
1J2W
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TETRAMERIC STRUCTURE OF ALDOLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Aldolase protein
Authors:Lokanath, N.K., Shiromizu, I., Miyano, M., Yokoyama, S., Kuramitsu, S., Kunishima, N., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-01-14
Release date:2003-04-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of aldolase from Thermus thermophilus HB8 showing the contribution of oligomeric state to thermostability.
Acta Crystallogr.,Sect.D, 60, 2004
1OD6
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THE CRYSTAL STRUCTURE OF PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE FROM THERMUS THERMOPHILUS IN COMPLEX WITH 4'-PHOSPHOPANTETHEINE
Descriptor:PHOSPHOPANTETHEINE ADENYLYLTRANSFERASE, 4'-PHOSPHOPANTETHEINE, SULFATE ION
Authors:Takahashi, H., Inagaki, E., Miyano, M., Tahirov, T.H.
Deposit date:2003-02-13
Release date:2003-03-13
Last modified:2015-12-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure and Implications for the Thermal Stability of Phosphopantetheine Adenylyltransferase from Thermus Thermophilus.
Acta Crystallogr.,Sect.D, 60, 2004
1UI0
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CRYSTAL STRUCTURE OF URACIL-DNA GLYCOSYLASE FROM THERMUS THERMOPHILUS HB8
Descriptor:Uracil-DNA Glycosylase, SULFATE ION, IRON/SULFUR CLUSTER, ...
Authors:Hoseki, J., Okamoto, A., Masui, R., Shibata, T., Inoue, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-14
Release date:2003-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of a Family 4 Uracil-DNA Glycosylase from Thermus thermophilus HB8
J.Mol.Biol., 333, 2003
1V3W
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STRUCTURE OF FERRIPYOCHELIN BINDING PROTEIN FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:ferripyochelin binding protein, ZINC ION, CALCIUM ION, ...
Authors:Jeyakanthan, J., Tahirov, T.H., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-07
Release date:2003-11-18
Last modified:2013-01-30
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Observation of a calcium-binding site in the gamma-class carbonic anhydrase from Pyrococcus horikoshii.
Acta Crystallogr.,Sect.D, 64, 2008
2WQK
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CRYSTAL STRUCTURE OF SURE PROTEIN FROM AQUIFEX AEOLICUS
Descriptor:5'-NUCLEOTIDASE SURE, SULFATE ION, SODIUM ION
Authors:Antonyuk, S.V., Ellis, M.J., Strange, R.W., Hasnain, S.S., Bessho, Y., Kuramitsu, S., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2009-08-23
Release date:2009-09-29
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure of Sure Protein from Aquifex Aeolicus Vf5 at 1.5 A Resolution.
Acta Crystallogr.,Sect.F, 65, 2009
2Z0J
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CRYSTAL STRUCTURE OF UNCHARACTERIZED CONSERVED PROTEIN FROM THERMUS THERMOPHILUS HB8
Descriptor:Putative uncharacterized protein TTHA1438, CALCIUM ION, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID
Authors:Nakagawa, N., Kukimoto-Niino, M., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-07
Release date:2007-11-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of uncharacterized conserved protein from Thermus thermophilus HB8
To be Published
2ZCW
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CRYSTAL STRUCTURE OF TTHA1359, A TRANSCRIPTIONAL REGULATOR, CRP/FNR FAMILY FROM THERMUS THERMOPHILUS HB8
Descriptor:Transcriptional regulator, FNR/CRP family, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Agari, Y., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-11-13
Release date:2007-12-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Global gene expression mediated by Thermus thermophilus SdrP, a CRP/FNR family transcriptional regulator
Mol.Microbiol., 70, 2008
3AKE
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CRYSTAL STRUCTURE OF CMP KINASE IN COMPLEX WITH CMP FROM THERMUS THERMOPHILUS HB8
Descriptor:Cytidylate kinase, CYTIDINE-5'-MONOPHOSPHATE, MAGNESIUM ION
Authors:Mega, R., Nakagawa, N., Kuramitsu, S., Masui, R.
Deposit date:2010-07-12
Release date:2011-07-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8
To be Published